Sub-family  

Parent family
HOM000113
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003350 has 29 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G05650 aly name=fgenesh2_kg.2__412__AT1G60490.1;pid=475282;prot=eq;tid=475282 + scaffold_2 No
AT1G60490 ath Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.;vacuolar protein sorting 34 transcript=eq;prot=eq; - 1 No
BD2G40030 bdi phosphatidylinositol-4,5-bisphosphate 3-kinase activity, 1-phosphatidylinositol-3-kinase activity, phosphatidylinositol-4-phosphate 3-kinase activity (Blast2GO) pid=Bradi2g40030.1;tid=Bradi2g40030.1;GeneName=Bradi2g40030;transcript=eq;prot=eq + Bd2 No
BD3G20220 bdi 1-phosphatidylinositol-3-kinase activity (Blast2GO) pid=Bradi3g20220.1;tid=Bradi3g20220.1;GeneName=Bradi3g20220;transcript=eq;prot=eq - Bd3 No
CP00069G00610 cpa name=evm.TU.supercontig_69.61;pid=evm.TU.supercontig_69.61;prot=eq;transcript=eq - supercontig_69 No
CR01G07340 cre name=SAN_861592;pid=196943;prot=eq;tid=196948;transcript=eq + chromosome_1 No
FV0G08470 fve Phosphatidylinositol 3-kinase, root isoform (PtdIns-3-kinase) (similar to) transcript=eq;prot=eq;pid=gene06214 + scf0513158 No
GM04G10090 gma 04 pid=16255495;transcript=eq;prot=eq;name=Glyma04g10090.1 + Gm04 No
GM06G10090 gma 06 pid=16262388;transcript=eq;prot=eq;name=Glyma06g10090.1 + Gm06 No
LJ2G018310 lja prot=eq;transcript=eq;scaffold=CM0008;name=chr2.CM0008.220.nc - chr2 No
MD13G006710 mdo transcript=eq;prot=eq;pid=MDP0000209145;tid=MDP0000209145;contig=MDC015890.82 - 13 No
MD16G005350 mdo transcript=eq;prot=eq;pid=MDP0000178055;tid=MDP0000178055;contig=MDC006260.459 - 16 No
ME03823G00140 mes PACid=17992831;RNAname=cassava4.1_001818m;GeneName=cassava4.1_001818m.g;transcript=eq;prot=eq - scaffold03823 No
MRCC299_14G00880 mrcc299 name=e_gw2.14.40.1;pid=88102;prot=eq;tid=88102;transcript=eq - Chr_14 No
MT5G034120 mtr Phosphatidylinositol 3-kinase (AHRD V1 **** Q8GUA6_MEDTR); contains Interpro domain(s) IPR008290 Phosphatidylinositol 3-kinase, Vps34 type IPR015433 Phosphatidylinositol Kinase IPR018936 Phosphatidylinositol 3- and 4-kinase, conserved site IPR000403 Phosphatidylinositol 3- and 4-kinase, catalytic transcript=eq;prot=eq;pid=Medtr5g034120.1; + 5 No
OL03G01890 olu NULL name=e_gwEuk.3.33.1,pid=34142,prot=eq,tid=34142 - Chr_3 No
OS05G08810 osa phosphatidylinositol 3%2Dkinase, root isoform, putative, expressed transcript=eq;prot=eq; - 5 No
OS08G21590 osa phosphatidylinositol 3%2Dkinase, root isoform, putative, expressed transcript=eq;prot=eq; - 8 No
OSINDICA_08G20190 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC026164; - Chr08 No
OT03G01870 ota phosphatidylinositol 3-kinase (ISS); name=OT03G01870;protein_id=CAL52839.1;prot=eq - chrom03 No
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