Sub-family  

Parent family
HOM000191
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003313 has 29 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G25980 aly name=fgenesh2_kg.1__2632__AT1G24170.1;pid=472678;prot=eq;tid=472678 - scaffold_1 No
AL2G18440 aly name=fgenesh2_kg.2__1263__AT1G70090.1;pid=476133;prot=eq;tid=476133 + scaffold_2 No
AT1G24170 ath Encodes a protein with putative galacturonosyltransferase activity.;Nucleotide-diphospho-sugar transferases superfamily protein transcript=eq;prot=eq; - 1 No
AT1G70090 ath Encodes a protein with putative galacturonosyltransferase activity.;glucosyl transferase family 8 transcript=eq;prot=eq; + 1 No
BD1G44470 bdi Putative glycosyltransferase, CAZy family GT8 pid=Bradi1g44470.1;tid=Bradi1g44470.1;GeneName=Bradi1g44470;Name=BdGATL4;transcript=eq;prot=eq - Bd1 No
BD3G59760 bdi Putative glycosyltransferase, CAZy family GT8 pid=Bradi3g59760.1;tid=Bradi3g59760.1;GeneName=Bradi3g59760;Name=BdGATL3;transcript=eq;prot=eq + Bd3 No
CP00005G03190 cpa name=evm.TU.supercontig_5.319;pid=evm.TU.supercontig_5.319;prot=eq;transcript=eq + supercontig_5 No
FV4G22580 fve Glycosyltransferase 8 domain-containing protein 1 (probable) transcript=eq;prot=eq;pid=gene00730 - LG4 No
GM01G04460 gma 01 pid=16243389;transcript=eq;prot=eq;name=Glyma01g04460.1 - Gm01 No
GM02G03090 gma 02 pid=16246805;transcript=eq;prot=eq;name=Glyma02g03090.1 + Gm02 No
LJ2G017120 lja prot=eq;transcript=eq;scaffold=CM0028;name=chr2.CM0028.140.nc - chr2 No
MD00G266620 mdo transcript=eq;prot=eq;pid=MDP0000401001;tid=MDP0000401001;contig=MDC011433.392 - MDC011433.392 No
MD16G004670 mdo transcript=eq;prot=eq;pid=MDP0000185643;tid=MDP0000185643;contig=MDC011581.443 + 16 No
ME04209G00450 mes PACid=17993642;RNAname=cassava4.1_027039m;GeneName=cassava4.1_027039m.g;transcript=eq;prot=eq - scaffold04209 No
ME11495G01050 mes PACid=17988322;RNAname=cassava4.1_027652m;GeneName=cassava4.1_027652m.g;transcript=eq;prot=eq + scaffold11495 No
MT5G036580 mtr Glycosyltransferase CAZy family GT8 (AHRD V1 **-- B9HMR5_POPTR); contains Interpro domain(s) IPR002495 Glycosyl transferase, family 8 transcript=eq;prot=eq;pid=Medtr5g036580.1; - 5 No
OS02G50600 osa glycosyl transferase 8 domain containing protein, putative, expressed transcript=eq;prot=eq; - 2 No
OS06G13760 osa glycosyl transferase 8 domain containing protein, putative, expressed transcript=eq;prot=eq; + 6 No
OSINDICA_02G48860 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC040195; - Chr02 No
OSINDICA_06G13260 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC038760; + Chr06 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier