Sub-family  

Parent family
HOM001299
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003312 has 29 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G25150 aly name=fgenesh2_kg.1__2543__AT1G23310.1;pid=472589;prot=eq;tid=472589 - scaffold_1 No
AL2G19130 aly name=scaffold_201947.1;pid=894873;prot=eq;tid=926386 + scaffold_2 No
AT1G23310 ath Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.;glutamate:glyoxylate aminotransferase transcript=eq;prot=eq; - 1 No
AT1G70580 ath Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.;alanine-2-oxoglutarate aminotransferase 2 transcript=eq;prot=eq; + 1 No
BD1G59220 bdi alanine transaminase activity (Blast2GO) pid=Bradi1g59220.1;tid=Bradi1g59220.1;GeneName=Bradi1g59220;transcript=eq;prot=eq - Bd1 No
CP00033G00060 cpa name=evm.TU.supercontig_33.6;pid=evm.TU.supercontig_33.6;prot=eq;transcript=eq + supercontig_33 No
CR10G07490 cre name=FER_estExt_gwp_1H.C_40110;pid=206184;prot=eq;tid=206189;transcript=eq - chromosome_10 No
FV0G10950 fve Probable alanine aminotransferase, mitochondrial (ALT), Precursor (putative) transcript=eq;prot=eq;pid=gene07008 - scf0513160 No
GM01G03260 gma 01 pid=16243245;transcript=eq;prot=eq;name=Glyma01g03260.1 - Gm01 No
GM02G04320 gma 02 pid=16246943;transcript=eq;prot=eq;name=Glyma02g04320.1 + Gm02 No
LJ2G018750 lja prot=eq;transcript=eq;scaffold=CM0008;name=chr2.CM0008.660.nc + chr2 No
MD00G011070 mdo transcript=eq;prot=eq;pid=MDP0000815368;tid=MDP0000815368;contig=MDC000453.111 + MDC000453.111 No
MD13G007670 mdo transcript=eq;prot=eq;pid=MDP0000250058;tid=MDP0000250058;contig=MDC010401.161 - 13 No
MD16G006000 mdo transcript=eq;prot=eq;pid=MDP0000235318;tid=MDP0000235318;contig=MDC000453.153 - 16 No
ME04175G00120 mes PACid=17963347;RNAname=cassava4.1_006617m;GeneName=cassava4.1_006626m.g;transcript=eq;prot=eq + scaffold04175 No
ME12211G00140 mes PACid=17986422;RNAname=cassava4.1_006658m;GeneName=cassava4.1_006658m.g;transcript=eq;prot=eq + scaffold12211 No
MT5G033230 mtr Alanine aminotransferase 2 (AHRD V1 **** A8IKE5_SOYBN); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II transcript=eq;prot=eq;pid=Medtr5g033230.1; - 5 No
OS07G01760 osa aminotransferase, classes I and II, domain containing protein, expressed transcript=eq;prot=eq; - 7 No
OSINDICA_07G00660 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC022344; - Chr07 No
PP00064G01160 ppa NULL name=estExt_fgenesh1_pm.C_640020,pid=106172,prot=eq,tid=106172 - scaffold_64 No
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