Sub-family  

Parent family
HOM001544
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (4 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003278 has 29 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G05640 aly name=fgenesh1_pm.C_scaffold_1000471;pid=311691;prot=eq;tid=311691 - scaffold_1 No
AL4G16250 aly name=fgenesh1_pm.C_scaffold_4000942;pid=320885;prot=eq;tid=320885 + scaffold_4 No
AT1G06130 ath glyoxalase 2-4 (GLX2-4); FUNCTIONS IN: hydrolase activity, zinc ion binding, hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-5 (TAIR:AT2G31350.1); Has 15456 Blast hits to 15455 proteins in 2500 species: Archae - 395; Bacteria - 9969; Metazoa - 478; Fungi - 329; Plants - 213; Viruses - 0; Other Eukaryotes - 4072 (source: NCBI BLink).;glyoxalase 2-4 transcript=eq;prot=eq; - 1 No
AT2G31350 ath Encodes a mitochondrial glyoxalase 2 that can accommodate a number of different metal centers and with the predominant metal center being Fe(III)Zn(II).;glyoxalase 2-5 transcript=eq;prot=eq; + 2 No
BD4G35270 bdi hydroxyacylglutathione hydrolase activity, zinc ion binding (Blast2GO) pid=Bradi4g35270.1;tid=Bradi4g35270.1;GeneName=Bradi4g35270;transcript=eq;prot=eq - Bd4 No
CP00009G03080 cpa name=evm.TU.supercontig_9.308;pid=evm.TU.supercontig_9.308;prot=eq;transcript=eq - supercontig_9 No
CR12G15410 cre name=estExt_fgenesh1_pm.C_chromosome_120849;pid=380549;prot=eq;tid=380556;transcript=eq - chromosome_12 No
GM11G13470 gma 11 pid=16283755;transcript=eq;prot=eq;name=Glyma11g13470.1 + Gm11 No
GM12G05470 gma 12 pid=16286508;transcript=eq;prot=eq;name=Glyma12g05470.1 + Gm12 No
GM13G42070 gma 13 pid=16293485;transcript=eq;prot=eq;name=Glyma13g42070.1 - Gm13 No
GM15G03320 gma 15 pid=16297476;transcript=eq;prot=eq;name=Glyma15g03320.1 + Gm15 No
MD04G000690 mdo transcript=eq;prot=eq;pid=MDP0000132236;tid=MDP0000132236;contig=MDC021467.174 - 4 No
ME06155G00050 mes PACid=17967104;RNAname=cassava4.1_011713m;GeneName=cassava4.1_011713m.g;transcript=eq;prot=eq + scaffold06155 No
ME09798G00080 mes PACid=17982077;RNAname=cassava4.1_011683m;GeneName=cassava4.1_011683m.g;transcript=eq;prot=eq + scaffold09798 No
MRCC299_06G02040 mrcc299 name=fgenesh2_kg.C_Chr_06000041;pid=96426;prot=eq;tid=96426;transcript=eq + Chr_06 No
MT4G068100 mtr Hydroxyacylglutathione hydrolase 2, mitochondrial (AHRD V1 **** Q9SID3); contains Interpro domain(s) IPR017782 Hydroxyacylglutathione hydrolase transcript=eq;prot=eq;pid=Medtr4g068100.1; + 4 No
OL06G02730 olu NULL name=gwEuk.6.435.1,pid=6889,prot=eq,tid=6889 + Chr_6 No
OS09G34100 osa metallo%2Dbeta%2Dlactamase family protein, putative, expressed transcript=eq;prot=eq; - 9 No
OSINDICA_09G27390 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC029332; - Chr09 No
OT06G02990 ota hydroxyacylglutathione hydrolase, putative (ISS); name=OT06G02990;protein_id=CAL53558.1;prot=eq + chrom06 No
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