Sub-family  

Parent family
HOM000025
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO002989 has 30 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 30 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G29450 aly name=scaffold_203033.1;pid=895959;prot=eq;tid=927472 + scaffold_2 No
AT1G80350 ath encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; - 1 No
BD2G46700 bdi microtubule-severing ATPase activity (Blast2GO) pid=Bradi2g46700.1;tid=Bradi2g46700.1;GeneName=Bradi2g46700;transcript=eq;prot=eq + Bd2 No
CP00010G01620 cpa name=evm.TU.supercontig_10.162;pid=evm.TU.supercontig_10.162;prot=eq;transcript=eq + supercontig_10 No
CR10G02130 cre name=estExt_GenewiseH_1.C_80022;pid=53314;prot=eq;tid=53314;transcript=eq - chromosome_10 No
FV6G16840 fve Katanin p60 ATPase-containing subunit (Katanin p60 subunit) (similar to) transcript=eq;prot=eq;pid=gene06000 + LG6 No
GM07G03820 gma 07 pid=16266085;transcript=eq;prot=eq;name=Glyma07g03820.1 - Gm07 No
GM08G22210 gma 08 pid=16272063;transcript=eq;prot=eq;name=Glyma08g22210.1 + Gm08 No
GM15G01510 gma 15 pid=16297247;transcript=eq;prot=eq;name=Glyma15g01510.1 - Gm15 No
LJ3G021580 lja prot=eq;transcript=eq;scaffold=CM0226;name=chr3.CM0226.260.nc + chr3 No
MD00G387240 mdo transcript=eq;prot=eq;pid=MDP0000304032;tid=MDP0000304032;contig=MDC017520.105 - MDC017520.105 No
MD01G014390 mdo transcript=eq;prot=eq;pid=MDP0000138600;tid=MDP0000138600;contig=MDC010422.310 + 1 No
MD08G005580 mdo transcript=eq;prot=eq;pid=MDP0000283910;tid=MDP0000283910;contig=MDC006795.357 + 8 No
ME02196G00020 mes PACid=17982974;RNAname=cassava4.1_005564m;GeneName=cassava4.1_005564m.g;transcript=eq;prot=eq - scaffold02196 No
ME02853G00230 mes PACid=17959768;RNAname=cassava4.1_005563m;GeneName=cassava4.1_005563m.g;transcript=eq;prot=eq - scaffold02853 No
MRCC299_04G07340 mrcc299 name=fgenesh2_pm.C_Chr_04000097;pid=97315;prot=eq;tid=97315;transcript=eq - Chr_04 No
OS01G49000 osa katanin p60 ATPase%2Dcontaining subunit, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G46350 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003049; + Chr01 No
PP00099G00240 ppa NULL name=fgenesh2_pg.scaffold_99000028,pid=230305,prot=eq,tid=230305 - scaffold_99 No
PP00213G00670 ppa NULL name=estExt_fgenesh1_pg.C_2130068,pid=169601,prot=eq,tid=169601 + scaffold_213 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier