Sub-family  

Parent family
HOM000063
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO002974 has 30 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 30 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G15420 aly name=Al_scaffold_0002_1383;pid=876789;prot=eq;tid=908302 - scaffold_2 No
AT1G67510 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01210.1); Has 143953 Blast hits to 102465 proteins in 3529 species: Archae - 126; Bacteria - 14252; Metazoa - 36189; Fungi - 7617; Plants - 70099; Viruses - 200; Other Eukaryotes - 15470 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 1 No
BD4G39617 bdi pid=Bradi4g39617.1;tid=Bradi4g39617.1;GeneName=Bradi4g39617;transcript=eq;prot=eq - Bd4 No
CP00043G00190 cpa name=evm.TU.supercontig_43.19;pid=evm.TU.supercontig_43.19;prot=eq;transcript=eq - supercontig_43 No
GM01G31480 gma 01 pid=16244873;transcript=eq;prot=eq;name=Glyma01g31480.1 + Gm01 No
GM03G06320 gma 03 pid=16251259;transcript=eq;prot=eq;name=Glyma03g06320.1 - Gm03 No
GM07G19200 gma 07 pid=16267749;transcript=eq;prot=eq;name=Glyma07g19200.1 + Gm07 No
GM18G43730 gma 18 pid=16310359;transcript=eq;prot=eq;name=Glyma18g43730.1 + Gm18 No
LJ1G025490 lja partial;prot=eq;transcript=eq;scaffold=LjT01D01;name=chr1.LjT01D01.120.nd - chr1 No
LJ3G012490 lja partial;prot=eq;transcript=eq;scaffold=CM0116;name=chr3.CM0116.60.nd - chr3 No
MD00G386610 mdo transcript=eq;prot=eq;pid=MDP0000305994;tid=MDP0000305994;contig=MDC017493.409 - MDC017493.409 No
MD16G007110 mdo transcript=eq;prot=eq;pid=MDP0000266087;tid=MDP0000266087;contig=MDC001071.281 + 16 No
ME04175G01110 mes PACid=17963345;RNAname=cassava4.1_002573m;GeneName=cassava4.1_002573m.g;transcript=ne;prot=eq + scaffold04175 No
ME07543G00470 mes PACid=17978282;RNAname=cassava4.1_002604m;GeneName=cassava4.1_002604m.g;transcript=eq;prot=eq + scaffold07543 No
MT4G014350 mtr Leucine-rich repeat receptor-like protein kinase (AHRD V1 ***- O64794_ARATH); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase transcript=eq;prot=eq;pid=Medtr4g014350.1; - 4 No
MT7G070200 mtr Receptor protein kinase-like protein At4g34220 (AHRD V1 *-*- Q94C77); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase transcript=eq;prot=eq;pid=Medtr7g070200.1; + 7 No
OS12G13300 osa expressed protein transcript=eq;prot=eq; + 12 No
OSINDICA_12G10460 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC044839; + Chr12 No
PP00012G01750 ppa NULL name=gw1.12.107.1,pid=24150,prot=eq,tid=24150 - scaffold_12 No
PP00033G00370 ppa NULL name=gw1.33.110.1,pid=24936,prot=eq,tid=24936 + scaffold_33 No
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