Sub-family 
- Id
- ORTHO002932
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000047
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (3 genes)
- ath
- Arabidopsis thaliana (3 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (4 genes)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ppa
- Physcomitrella patens (2 genes)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family ORTHO002932 has 30 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO002932
Page 1 of 2, showing 20 records out of 30 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G28290 | aly | name=fgenesh2_kg.1__2866__AT1G24330.1;pid=472912;prot=eq;tid=472912 | - | scaffold_1 | No | |
| AL1G29040 | aly | name=scaffold_103118.1;pid=890324;prot=eq;tid=921837 | - | scaffold_1 | No | |
| AL2G15500 | aly | name=fgenesh1_pm.C_scaffold_2000802;pid=315769;prot=eq;tid=315769 | + | scaffold_2 | No | |
| AT1G24330 | ath | ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 3064 Blast hits to 2955 proteins in 242 species: Archae - 0; Bacteria - 60; Metazoa - 394; Fungi - 149; Plants - 2167; Viruses - 3; Other Eukaryotes - 291 (source: NCBI BLink).;ARM repeat superfamily protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G27910 | ath | Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.;plant U-box 45 | transcript=eq;prot=eq; | - | 1 | No |
| AT1G67530 | ath | ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G24330.1); Has 3478 Blast hits to 3233 proteins in 245 species: Archae - 0; Bacteria - 16; Metazoa - 777; Fungi - 226; Plants - 2201; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink).;ARM repeat superfamily protein | transcript=eq;prot=eq; | + | 1 | No |
| BD2G57817 | bdi | pid=Bradi2g57817.1;tid=Bradi2g57817.1;GeneName=Bradi2g57817;transcript=eq;prot=eq | - | Bd2 | No | |
| CP00043G00210 | cpa | name=evm.TU.supercontig_43.21;pid=evm.TU.supercontig_43.21;prot=eq;transcript=eq | + | supercontig_43 | No | |
| FV0G12560 | fve | U-box domain-containing protein 45 (putative) | transcript=eq;prot=eq;pid=gene07151 | - | scf0513160 | No |
| GM05G27880 | gma | 05 | pid=16259865;transcript=eq;prot=eq;name=Glyma05g27880.1 | - | Gm05 | No |
| GM08G10860 | gma | 08 | pid=16270700;transcript=eq;prot=eq;name=Glyma08g10860.1 | - | Gm08 | No |
| GM11G37220 | gma | 11 | pid=16285678;transcript=eq;prot=eq;name=Glyma11g37220.1 | + | Gm11 | No |
| GM18G01180 | gma | 18 | pid=16307544;transcript=eq;prot=eq;name=Glyma18g01180.1 | + | Gm18 | No |
| MD13G008910 | mdo | transcript=eq;prot=eq;pid=MDP0000460903;tid=MDP0000460903;contig=MDC004881.433 | - | 13 | No | |
| MD16G007090 | mdo | transcript=eq;prot=eq;pid=MDP0000881928;tid=MDP0000881928;contig=MDC005923.474 | - | 16 | No | |
| ME04175G01090 | mes | PACid=17963329;RNAname=cassava4.1_002028m;GeneName=cassava4.1_002028m.g;transcript=eq;prot=eq | - | scaffold04175 | No | |
| ME07543G00450 | mes | PACid=17978232;RNAname=cassava4.1_002078m;GeneName=cassava4.1_002078m.g;transcript=eq;prot=eq | - | scaffold07543 | No | |
| MT3G085610 | mtr | U-box domain-containing protein (AHRD V1 *-*- Q1EPA8_MUSAC); contains Interpro domain(s) IPR011989 Armadillo-like helical | transcript=eq;prot=eq;pid=Medtr3g085610.1; | + | 3 | No |
| OS01G67500 | osa | armadillo%2Fbeta%2Dcatenin repeat family protein, putative, expressed | transcript=eq;prot=eq; | - | 1 | No |
| OSINDICA_01G64090 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC004335; | - | Chr01 | No |