Sub-family  

Parent family
HOM000493
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (1 gene)



The gene family ORTHO002856 has 31 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT1G28695 ath Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28710.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein transcript=eq;prot=eq; - 1 No
AT1G28700 ath Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28710.3); Has 309 Blast hits to 303 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein transcript=eq;prot=eq; - 1 No
AT1G28710 ath Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28700.1); Has 346 Blast hits to 340 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 321; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein transcript=eq;prot=eq; - 1 No
BD1G09720 bdi Similar to glycosyltransferase. CAZy family GT77 pid=Bradi1g09720.1;tid=Bradi1g09720.1;GeneName=Bradi1g09720;Name=BdGT77E1;transcript=eq;prot=eq - Bd1 No
CP00013G02040 cpa name=evm.TU.supercontig_13.204;pid=evm.TU.supercontig_13.204;prot=eq;transcript=eq + supercontig_13 No
FV7G20590 fve Uncharacterized protein At1g28695, Precursor (similar to) transcript=eq;prot=eq;pid=gene05326 - LG7 No
FV7G31710 fve Uncharacterized protein At1g28695, Precursor (similar to) transcript=eq;prot=eq;pid=gene21406 - LG7 No
GM03G25590 gma 03 pid=16252327;transcript=eq;prot=eq;name=Glyma03g25590.1 + Gm03 No
GM03G25600 gma 03 pid=16252328;transcript=eq;prot=eq;name=Glyma03g25600.1 + Gm03 No
GM07G13220 gma 07 pid=16267143;transcript=eq;prot=eq;name=Glyma07g13220.1 - Gm07 No
LJ0G230940 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_075559;name=LjSGA_075559.1 - LjSGA_075559 No
MD00G490300 mdo transcript=eq;prot=eq;pid=MDP0000309587;tid=MDP0000309587;contig=MDC023325.61 + MDC023325.61 No
MD02G020070 mdo transcript=eq;prot=eq;pid=MDP0000248652;tid=MDP0000248652;contig=MDC005056.227 - 2 No
MD07G015960 mdo transcript=eq;prot=eq;pid=MDP0000298955;tid=MDP0000298955;contig=MDC012883.422 - 7 No
ME04450G00580 mes PACid=17985187;RNAname=cassava4.1_021057m;GeneName=cassava4.1_021057m.g;transcript=eq;prot=eq + scaffold04450 No
ME09876G01130 mes PACid=17967355;RNAname=cassava4.1_026163m;GeneName=cassava4.1_026163m.g;transcript=eq;prot=eq + scaffold09876 No
MT1G044340 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr1g044340.1; + 1 No
OS03G52160 osa regulatory protein, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G50330 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC008223; + Chr03 No
PT00G00460 ptr PACid=17345605;name=POPTR_1330s00210;alias=pt002028m,gw1.232.63.1; transcript=eq;prot=eq;protein_id=17345605; - scaffold_1330 No
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