Sub-family 
- Id
- ORTHO002856
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000493
- Keywords
-
Overview of gene family content
- ath
- Arabidopsis thaliana (3 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (2 genes)
- gma
- Glycine max (3 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (3 genes)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ptr
- Populus trichocarpa (3 genes)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (2 genes)
- vvi
- Vitis vinifera (3 genes)
- zma
- Zea mays (1 gene)
The gene family ORTHO002856 has 31 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO002856
Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AT1G28695 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28710.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G28700 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28710.3); Has 309 Blast hits to 303 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G28710 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28700.1); Has 346 Blast hits to 340 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 321; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| BD1G09720 | bdi | Similar to glycosyltransferase. CAZy family GT77 | pid=Bradi1g09720.1;tid=Bradi1g09720.1;GeneName=Bradi1g09720;Name=BdGT77E1;transcript=eq;prot=eq | - | Bd1 | No |
| CP00013G02040 | cpa | name=evm.TU.supercontig_13.204;pid=evm.TU.supercontig_13.204;prot=eq;transcript=eq | + | supercontig_13 | No | |
| FV7G20590 | fve | Uncharacterized protein At1g28695, Precursor (similar to) | transcript=eq;prot=eq;pid=gene05326 | - | LG7 | No |
| FV7G31710 | fve | Uncharacterized protein At1g28695, Precursor (similar to) | transcript=eq;prot=eq;pid=gene21406 | - | LG7 | No |
| GM03G25590 | gma | 03 | pid=16252327;transcript=eq;prot=eq;name=Glyma03g25590.1 | + | Gm03 | No |
| GM03G25600 | gma | 03 | pid=16252328;transcript=eq;prot=eq;name=Glyma03g25600.1 | + | Gm03 | No |
| GM07G13220 | gma | 07 | pid=16267143;transcript=eq;prot=eq;name=Glyma07g13220.1 | - | Gm07 | No |
| LJ0G230940 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_075559;name=LjSGA_075559.1 | - | LjSGA_075559 | No | |
| MD00G490300 | mdo | transcript=eq;prot=eq;pid=MDP0000309587;tid=MDP0000309587;contig=MDC023325.61 | + | MDC023325.61 | No | |
| MD02G020070 | mdo | transcript=eq;prot=eq;pid=MDP0000248652;tid=MDP0000248652;contig=MDC005056.227 | - | 2 | No | |
| MD07G015960 | mdo | transcript=eq;prot=eq;pid=MDP0000298955;tid=MDP0000298955;contig=MDC012883.422 | - | 7 | No | |
| ME04450G00580 | mes | PACid=17985187;RNAname=cassava4.1_021057m;GeneName=cassava4.1_021057m.g;transcript=eq;prot=eq | + | scaffold04450 | No | |
| ME09876G01130 | mes | PACid=17967355;RNAname=cassava4.1_026163m;GeneName=cassava4.1_026163m.g;transcript=eq;prot=eq | + | scaffold09876 | No | |
| MT1G044340 | mtr | Unknown Protein (AHRD V1) | transcript=eq;prot=eq;pid=Medtr1g044340.1; | + | 1 | No |
| OS03G52160 | osa | regulatory protein, putative, expressed | transcript=eq;prot=eq; | + | 3 | No |
| OSINDICA_03G50330 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC008223; | + | Chr03 | No |
| PT00G00460 | ptr | PACid=17345605;name=POPTR_1330s00210;alias=pt002028m,gw1.232.63.1; | transcript=eq;prot=eq;protein_id=17345605; | - | scaffold_1330 | No |