Sub-family  

Parent family
HOM003378
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO002745 has 31 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G29230 aly name=fgenesh2_kg.4__2350__AT2G42040.1;pid=483290;prot=eq;tid=483290 + scaffold_4 No
AT2G42040 ath CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). transcript=eq;prot=eq; + 2 No
BD1G46270 bdi pid=Bradi1g46270.1;tid=Bradi1g46270.1;GeneName=Bradi1g46270;transcript=eq;prot=eq - Bd1 No
CP00085G00550 cpa name=evm.TU.supercontig_85.55;pid=evm.TU.supercontig_85.55;prot=eq;transcript=eq - supercontig_85 No
FV0G50190 fve Protein ycf2 (probable) transcript=eq;prot=eq;pid=gene00456 + scf0512949 No
GM02G28970 gma 02 pid=16248742;transcript=eq;prot=eq;name=Glyma02g28970.1 + Gm02 No
GM03G30170 gma 03 pid=16252813;transcript=eq;prot=eq;name=Glyma03g30170.1 - Gm03 No
GM09G16880 gma 09 pid=16275797;transcript=eq;prot=eq;name=Glyma09g16880.1 + Gm09 No
GM19G33070 gma 19 pid=16313579;transcript=eq;prot=eq;name=Glyma19g33070.1 - Gm19 No
LJ0G439650 lja partial;prot=eq;transcript=eq;scaffold=LjT35F01;name=LjT35F01.80.nd - chr0 No
MD00G510000 mdo transcript=eq;prot=eq;pid=MDP0000154434;tid=MDP0000154434;contig=MDC032848.7 + MDC032848.7 No
MD12G005130 mdo transcript=eq;prot=eq;pid=MDP0000121493;tid=MDP0000121493;contig=MDC004400.583 + 12 No
ME00823G00050 mes PACid=17993733;RNAname=cassava4.1_011866m;GeneName=cassava4.1_011866m.g;transcript=eq;prot=eq + scaffold00823 No
ME00823G00060 mes PACid=17993736;RNAname=cassava4.1_011424m;GeneName=cassava4.1_011424m.g;transcript=eq;prot=eq - scaffold00823 No
ME03602G00010 mes PACid=17979898;RNAname=cassava4.1_010848m;GeneName=cassava4.1_010848m.g;transcript=ne;prot=eq - scaffold03602 No
MT7G093350 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR014977 WRC transcript=eq;prot=eq;pid=Medtr7g093350.1; - 7 No
MT7G093360 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR014977 WRC transcript=eq;prot=eq;pid=Medtr7g093360.1; - 7 No
OS02G53360 osa expressed protein transcript=eq;prot=eq; - 2 No
OSINDICA_02G51730 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC015582; - Chr02 No
PT06G19250 ptr PACid=17327804;name=POPTR_0006s20770;alias=pt018127m,eugene3.00061205; transcript=eq;prot=eq;protein_id=17327804; + scaffold_6 No
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