Sub-family  

Parent family
HOM001846
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO002690 has 31 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G06910 aly name=fgenesh2_kg.3__674__AT3G06650.1;pid=477973;prot=eq;tid=477973 - scaffold_3 No
AL8G13140 aly name=scaffold_801324.1;pid=917924;prot=eq;tid=949437 + scaffold_8 No
AT3G06650 ath One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase;ATP-citrate lyase B-1 transcript=eq;prot=eq; - 3 No
AT5G49460 ath One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL);ATP citrate lyase subunit B 2 transcript=eq;prot=eq; + 5 No
BD2G11480 bdi succinate-CoA ligase (ADP-forming) activity, succinate-CoA ligase (GDP-forming) activity (Blast2GO) pid=Bradi2g11480.1;tid=Bradi2g11480.1;GeneName=Bradi2g11480;transcript=eq;prot=eq - Bd2 No
CP00009G00530 cpa name=evm.TU.supercontig_9.53;pid=evm.TU.supercontig_9.53;prot=eq;transcript=eq - supercontig_9 No
CR02G03330 cre name=estExt_fgenesh2_pg.C_70318;pid=186611;prot=eq;tid=186611;transcript=eq - chromosome_2 No
FV3G39330 fve Probable ATP-citrate synthase (similar to) transcript=eq;prot=eq;pid=gene05118 - LG3 No
GM07G36840 gma 07 pid=16268966;transcript=eq;prot=eq;name=Glyma07g36840.1 - Gm07 No
GM09G04000 gma 09 pid=16274711;transcript=eq;prot=eq;name=Glyma09g04000.1 - Gm09 No
GM15G15010 gma 15 pid=16298831;transcript=eq;prot=eq;name=Glyma15g15010.1 - Gm15 No
GM15G15020 gma 15 pid=16298832;transcript=eq;prot=eq;name=Glyma15g15020.1 - Gm15 No
GM17G03700 gma 17 pid=16304302;transcript=eq;prot=eq;name=Glyma17g03700.1 + Gm17 No
LJ6G015000 lja prot=eq;transcript=eq;scaffold=CM1829;name=chr6.CM1829.160.nc + chr6 No
MD00G159380 mdo transcript=eq;prot=eq;pid=MDP0000814329;tid=MDP0000814329;contig=MDC006848.168 + MDC006848.168 No
MD13G014000 mdo transcript=eq;prot=eq;pid=MDP0000205540;tid=MDP0000205540;contig=MDC016260.70 - 13 No
ME00708G00470 mes PACid=17982639;RNAname=cassava4.1_003908m;GeneName=cassava4.1_003908m.g;transcript=eq;prot=eq - scaffold00708 No
ME01551G04410 mes PACid=17961776;RNAname=cassava4.1_003903m;GeneName=cassava4.1_003902m.g;transcript=eq;prot=eq + scaffold01551 No
MT2G034090 mtr ATP citrate lyase a-subunit (AHRD V1 **** Q93YH4_LUPAL); contains Interpro domain(s) IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IPR005810 Succinyl-CoA ligase, alpha subunit transcript=eq;prot=eq;pid=Medtr2g034090.1; - 2 No
OS01G19450 osa ATP%2Dcitrate synthase subunit 1, putative, expressed transcript=eq;prot=eq; - 1 No
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