Sub-family  

Parent family
HOM000016
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO002445 has 32 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 32 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G17650 aly name=fgenesh2_kg.3__1816__AT3G16520.3;pid=479115;prot=eq;tid=479115 - scaffold_3 No
AT3G16520 ath UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).;UDP-glucosyl transferase 88A1 transcript=eq;prot=eq; - 3 No
BD2G47420 bdi pid=Bradi2g47420.1;tid=Bradi2g47420.1;GeneName=Bradi2g47420;transcript=eq;prot=eq - Bd2 No
BD2G47430 bdi 2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity (Blast2GO) pid=Bradi2g47430.1;tid=Bradi2g47430.1;GeneName=Bradi2g47430;transcript=eq;prot=eq - Bd2 No
BD4G13760 bdi UDP-galactosyltransferase activity (Blast2GO) pid=Bradi4g13760.1;tid=Bradi4g13760.1;GeneName=Bradi4g13760;transcript=eq;prot=eq + Bd4 No
CP00003G00030 cpa name=evm.TU.supercontig_3.3;pid=evm.TU.supercontig_3.3;prot=eq;transcript=eq + supercontig_3 No
FV1G28990 fve Anthocyanidin 5,3-O-glucosyltransferase (putative) transcript=eq;prot=eq;pid=gene30501 + LG1 No
FV7G37520 fve Anthocyanidin 5,3-O-glucosyltransferase (probable) transcript=eq;prot=eq;pid=gene13167 - LG7 No
GM09G23750 gma 09 pid=16276078;transcript=eq;prot=eq;name=Glyma09g23750.1 + Gm09 No
GM16G29430 gma 16 pid=16303299;transcript=eq;prot=eq;name=Glyma16g29430.1 + Gm16 No
MD00G067400 mdo transcript=eq;prot=eq;pid=MDP0000277370;tid=MDP0000277370;contig=MDC002825.325 + MDC002825.325 No
MD00G067410 mdo transcript=eq;prot=eq;pid=MDP0000277371;tid=MDP0000277371;contig=MDC002825.325 + MDC002825.325 No
MD00G333000 mdo transcript=eq;prot=eq;pid=MDP0000242436;tid=MDP0000242436;contig=MDC014082.116 - MDC014082.116 No
MD00G333010 mdo transcript=eq;prot=eq;pid=MDP0000128265;tid=MDP0000128265;contig=MDC014082.116 - MDC014082.116 No
MD00G514000 mdo transcript=eq;prot=eq;pid=MDP0000318032;tid=MDP0000318032;contig=MDC037826.18 + MDC037826.18 No
MD00G514010 mdo transcript=eq;prot=eq;pid=MDP0000836043;tid=MDP0000836043;contig=MDC037826.18 - MDC037826.18 No
MD01G020920 mdo transcript=eq;prot=eq;pid=MDP0000294531;tid=MDP0000294531;contig=MDC012574.173 + 1 No
ME00341G00440 mes PACid=17960734;RNAname=cassava4.1_006967m;GeneName=cassava4.1_006967m.g;transcript=eq;prot=eq - scaffold00341 No
ME05979G00030 mes PACid=17992426;RNAname=cassava4.1_007484m;GeneName=cassava4.1_007484m.g;transcript=eq;prot=eq - scaffold05979 No
ME07853G00070 mes PACid=17994142;RNAname=cassava4.1_007441m;GeneName=cassava4.1_007441m.g;transcript=eq;prot=eq - scaffold07853 No
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