Sub-family  

Parent family
HOM000959
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO002412 has 32 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 32 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G18190 aly name=fgenesh1_pm.C_scaffold_2001020;pid=315987;prot=eq;tid=315987 - scaffold_2 No
AT1G69840 ath SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5669 Blast hits to 5668 proteins in 1821 species: Archae - 158; Bacteria - 3805; Metazoa - 307; Fungi - 277; Plants - 271; Viruses - 5; Other Eukaryotes - 846 (source: NCBI BLink).;SPFH/Band 7/PHB domain-containing membrane-associated protein family transcript=eq;prot=eq; - 1 No
BD3G35370 bdi pid=Bradi3g35370.2;tid=Bradi3g35370.2;GeneName=Bradi3g35370;transcript=eq;prot=eq - Bd3 No
BD4G28640 bdi pid=Bradi4g28640.1;tid=Bradi4g28640.1;GeneName=Bradi4g28640;transcript=eq;prot=eq + Bd4 No
CP00005G02630 cpa name=evm.TU.supercontig_5.263;pid=evm.TU.supercontig_5.263;prot=eq;transcript=eq - supercontig_5 No
CR01G15010 cre name=estExt_gwp_1W.C_420058;pid=139332;prot=eq;tid=139332;transcript=eq + chromosome_1 No
FV0G06090 fve Protein PPLZ12 (similar to) transcript=eq;prot=eq;pid=gene04018 - scf0513158 No
GM02G02540 gma 02 pid=16246740;transcript=eq;prot=eq;name=Glyma02g02540.1 - Gm02 No
GM13G05120 gma 13 pid=16289701;transcript=eq;prot=eq;name=Glyma13g05120.1 + Gm13 No
GM18G16270 gma 18 pid=16308957;transcript=eq;prot=eq;name=Glyma18g16270.1 - Gm18 No
GM19G02370 gma 19 pid=16311657;transcript=eq;prot=eq;name=Glyma19g02370.1 + Gm19 No
LJ2G011560 lja prot=eq;transcript=eq;scaffold=CM0225;name=chr2.CM0225.110.nc - chr2 No
LJ2G016370 lja prot=eq;transcript=eq;scaffold=CM0608;name=chr2.CM0608.590.nc + chr2 No
MD16G004220 mdo transcript=eq;prot=eq;pid=MDP0000653461;tid=MDP0000653461;contig=MDC003033.86 - 16 No
ME04209G00020 mes PACid=17993599;RNAname=cassava4.1_013297m;GeneName=cassava4.1_013322m.g;transcript=eq;prot=eq - scaffold04209 No
ME08053G00020 mes PACid=17975831;RNAname=cassava4.1_012754m;GeneName=cassava4.1_012754m.g;transcript=eq;prot=eq - scaffold08053 No
ME11495G00640 mes PACid=17988375;RNAname=cassava4.1_013316m;GeneName=cassava4.1_013296m.g;transcript=eq;prot=eq - scaffold11495 No
MRCC299_07G06610 mrcc299 name=estExt_Genewise2.C_Chr_070573;pid=91329;prot=eq;tid=91329;transcript=eq - Chr_07 No
OS08G30790 osa hypersensitive%2Dinduced response protein, putative, expressed transcript=eq;prot=eq; + 8 No
OS09G19710 osa hypersensitive%2Dinduced response protein, putative, expressed transcript=eq;prot=eq; + 9 No
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