Sub-family  

Parent family
HOM000231
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO002314 has 33 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 33 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G23800 aly name=fgenesh2_kg.8__1718__AT5G57990.1;pid=495902;prot=eq;tid=495902 - scaffold_8 No
AT5G57990 ath Encodes a ubiquitin-specific protease.;ubiquitin-specific protease 23 transcript=eq;prot=eq; - 5 No
BD1G47320 bdi ubiquitin-specific protease activity (Blast2GO) pid=Bradi1g47320.1;tid=Bradi1g47320.1;GeneName=Bradi1g47320;transcript=eq;prot=eq + Bd1 No
BD3G54040 bdi ubiquitin-specific protease activity (Blast2GO) pid=Bradi3g54040.1;tid=Bradi3g54040.1;GeneName=Bradi3g54040;transcript=eq;prot=eq + Bd3 No
CP00046G01540 cpa name=evm.TU.supercontig_46.154;pid=evm.TU.supercontig_46.154;prot=eq;transcript=eq + supercontig_46 No
CR14G04360 cre name=e_gwW.17.48.1;pid=117456;prot=eq;tid=117456;transcript=eq + chromosome_14 No
FV1G01610 fve Ubiquitin carboxyl-terminal hydrolase 23 (AtUBP23) (similar to) transcript=eq;prot=eq;pid=gene10073 + LG1 No
GM02G36480 gma 02 pid=16249245;transcript=eq;prot=eq;name=Glyma02g36480.1 + Gm02 No
GM17G08200 gma 17 pid=16304836;transcript=eq;prot=eq;name=Glyma17g08200.1 - Gm17 No
LJ4G022100 lja prot=eq;transcript=eq;scaffold=CM0179;name=chr4.CM0179.70.nd + chr4 No
MD00G328010 mdo transcript=eq;prot=eq;pid=MDP0000300100;tid=MDP0000300100;contig=MDC013865.233 - MDC013865.233 No
MD00G345080 mdo transcript=eq;prot=eq;pid=MDP0000242726;tid=MDP0000242726;contig=MDC015445.336 - MDC015445.336 No
MD02G001480 mdo transcript=eq;prot=eq;pid=MDP0000305793;tid=MDP0000305793;contig=MDC018883.25 - 2 No
ME09607G00090 mes PACid=17990516;RNAname=cassava4.1_001172m;GeneName=cassava4.1_001172m.g;transcript=eq;prot=eq - scaffold09607 No
MRCC299_12G04230 mrcc299 name=e_gw2.12.215.1;pid=87287;prot=eq;tid=87287;transcript=eq - Chr_12 No
MT4G130940 mtr Ubiquitin carboxyl-terminal hydrolase (AHRD V1 ***- A5CBT2_VITVI); contains Interpro domain(s) IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 transcript=eq;prot=eq;pid=Medtr4g130940.1; - 4 No
OL11G00020 olu NULL name=gwEuk.11.280.1,pid=5433,prot=eq,tid=5433 + Chr_11 No
OS02G55180 osa ubiquitin carboxyl%2Dterminal hydrolase domain containing protein, expressed transcript=eq;prot=eq; + 2 No
OS06G08530 osa ubiquitin carboxyl%2Dterminal hydrolase domain containing protein, expressed transcript=eq;prot=eq; - 6 No
OSINDICA_02G53420 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC015701; + Chr02 No
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