Sub-family  

Parent family
HOM000363
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO002177 has 33 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 33 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G27570 aly name=fgenesh2_kg.3__2641__AT3G23920.1;pid=479940;prot=eq;tid=479940 - scaffold_3 No
AT3G23920 ath Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.;beta-amylase 1 transcript=eq;prot=eq; + 3 No
BD1G75610 bdi Glycosyl hydrolase (GH), subfamily GH14 pid=Bradi1g75610.1;tid=Bradi1g75610.1;GeneName=Bradi1g75610;Name=BdGH14_5;transcript=eq;prot=eq - Bd1 No
BD3G28210 bdi Glycosyl hydrolase (GH), subfamily GH14 pid=Bradi3g28210.1;tid=Bradi3g28210.1;GeneName=Bradi3g28210;Name=BdGH14_9;transcript=eq;prot=eq + Bd3 No
CP00059G00410 cpa name=evm.TU.supercontig_59.41;pid=evm.TU.supercontig_59.41;prot=eq;transcript=eq - supercontig_59 No
CR01G09210 cre name=estExt_gwp_1H.C_10432;pid=129211;prot=eq;tid=129211;transcript=eq - chromosome_1 No
CR06G12220 cre name=estExt_fgenesh2_kg.C_120039;pid=183141;prot=eq;tid=183141;transcript=eq + chromosome_6 No
FV0G37830 fve Beta-amylase, Precursor (similar to) transcript=eq;prot=eq;pid=gene28316 + scf0513124 No
GM09G29840 gma 09 pid=16276656;transcript=eq;prot=eq;name=Glyma09g29840.1 - Gm09 No
GM16G34360 gma 16 pid=16303839;transcript=eq;prot=eq;name=Glyma16g34360.1 - Gm16 No
LJ0G019880 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_011445;name=LjSGA_011445.1 + LjSGA_011445 No
ME01551G00280 mes PACid=17961732;RNAname=cassava4.1_004325m;GeneName=cassava4.1_004325m.g;transcript=eq;prot=eq - scaffold01551 No
ME10563G02030 mes PACid=17993534;RNAname=cassava4.1_004345m;GeneName=cassava4.1_004345m.g;transcript=eq;prot=eq + scaffold10563 No
OS03G04770 osa beta%2Damylase, putative, expressed transcript=eq;prot=eq; + 3 No
OS10G32810 osa beta%2Damylase, putative, expressed transcript=eq;prot=eq; + 10 No
OSINDICA_03G03860 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005135; + Chr03 No
OSINDICA_10G23210 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC031096; + Chr10 No
OT03G03190 ota beta amylase 2 (IC); name=OT03G03190;protein_id=CAL52970.1;prot=eq - chrom03 No
PP00023G00080 ppa NULL name=e_gw1.23.25.1,pid=118142,prot=eq,tid=118142 + scaffold_23 No
PP00106G00350 ppa NULL name=estExt_gwp_gw1.C_1060035,pid=187470,prot=eq,tid=187470 + scaffold_106 No
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