Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO002007 has 34 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 34 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G10280 aly name=fgenesh2_kg.4__639__AT2G26990.1;pid=481579;prot=eq;tid=481579 - scaffold_4 No
AT2G26990 ath Represses photomorphogenesis and induces skotomorphogenesis in the dark.;proteasome family protein transcript=eq;prot=eq; - 2 No
BD2G10780 bdi transcription corepressor activity (Blast2GO) pid=Bradi2g10780.1;tid=Bradi2g10780.1;GeneName=Bradi2g10780;transcript=eq;prot=eq + Bd2 No
CP00084G00800 cpa name=evm.TU.supercontig_84.80;pid=evm.TU.supercontig_84.80;prot=eq;transcript=eq - supercontig_84 No
CR01G06380 cre name=estExt_fgenesh2_pg.C_10386;pid=189898;prot=eq;tid=189898;transcript=eq - chromosome_1 No
FV0G01830 fve COP9 signalosome complex subunit 2 (Signalosome subunit 2) (similar to) transcript=eq;prot=eq;pid=gene03759 - scf0513158 No
GM03G00670 gma 03 pid=16250682;transcript=eq;prot=eq;name=Glyma03g00670.1 - Gm03 No
GM05G14170 gma 05 pid=16258918;transcript=eq;prot=eq;name=Glyma05g14170.1 - Gm05 No
GM19G17660 gma 19 pid=16312459;transcript=eq;prot=eq;name=Glyma19g17660.1 - Gm19 No
GM19G30100 gma 19 pid=16313251;transcript=eq;prot=eq;name=Glyma19g30100.1 + Gm19 No
LJ1G042530 lja partial;prot=eq;transcript=eq;scaffold=CM1409;name=chr1.CM1409.130.nd - chr1 No
MD00G175160 mdo transcript=eq;prot=eq;pid=MDP0000179694;tid=MDP0000179694;contig=MDC007496.127 + MDC007496.127 No
MD00G312120 mdo transcript=eq;prot=eq;pid=MDP0000292529;tid=MDP0000292529;contig=MDC013244.156 + MDC013244.156 No
MD00G411560 mdo transcript=eq;prot=eq;pid=MDP0000307117;tid=MDP0000307117;contig=MDC018721.40 - MDC018721.40 No
ME06916G00740 mes PACid=17981890;RNAname=cassava4.1_007839m;GeneName=cassava4.1_007839m.g;transcript=eq;prot=eq + scaffold06916 No
ME07991G00380 mes PACid=17967814;RNAname=cassava4.1_007826m;GeneName=cassava4.1_007826m.g;transcript=eq;prot=eq - scaffold07991 No
MRCC299_01G02430 mrcc299 name=est_orfs.Chr_01_1209_3202190:3;pid=51338;prot=eq;tid=51338;transcript=eq - Chr_01 No
MT7G087530 mtr COP9 signalosome complex subunit 2 (AHRD V1 ***- B6TIW9_MAIZE); contains Interpro domain(s) IPR013143 PCI/PINT associated module transcript=eq;prot=eq;pid=Medtr7g087530.1; + 7 No
OL01G03620 olu NULL name=estExt_fgenesh1_pm.C_Chr_10062,pid=19323,prot=eq,tid=19323 - Chr_1 No
OS01G17180 osa proteasome subunit, putative, expressed transcript=eq;prot=eq; + 1 No
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