Sub-family  

Parent family
HOM000025
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO001833 has 35 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 35 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G28240 aly name=fgenesh2_kg.3__2682__AT5G58870.1;pid=479981;prot=eq;tid=479981 + scaffold_3 No
AL5G15810 aly name=fgenesh2_kg.5__1075__AT3G47060.1;pid=485083;prot=eq;tid=485083 + scaffold_5 No
AL8G24880 aly name=fgenesh2_kg.8__1826__AT5G58870.1;pid=496010;prot=eq;tid=496010 - scaffold_8 No
AT3G47060 ath encodes an FtsH protease that is localized to the chloroplast;FTSH protease 7 transcript=eq;prot=eq; + 3 No
AT5G58870 ath encodes an FtsH protease that is localized to the chloroplast;FTSH protease 9 transcript=eq;prot=eq; - 5 No
BD3G50240 bdi CTPase activity, ATPase activity (Blast2GO) pid=Bradi3g50240.1;tid=Bradi3g50240.1;GeneName=Bradi3g50240;transcript=eq;prot=eq + Bd3 No
CP00112G00520 cpa name=evm.TU.supercontig_112.53;pid=evm.TU.supercontig_112.53;prot=eq;transcript=eq - supercontig_112 No
FV3G21920 fve Cell division protease ftsH homolog 9, chloroplastic (AtFtsH9), Precursor (putative) transcript=eq;prot=eq;pid=gene07986 + LG3 No
GM00G00100 gma 28 pid=16242686;transcript=eq;prot=eq;name=Glyma0028s00210.2 - scaffold_28 No
GM00G00105 gma 28 pid=16242685;transcript=eq;prot=eq;name=Glyma0028s00210.1 - scaffold_28 No
GM02G39040 gma 02 pid=16249530;transcript=eq;prot=eq;name=Glyma02g39040.1 + Gm02 No
GM14G37090 gma 14 pid=16296681;transcript=eq;prot=eq;name=Glyma14g37090.1 + Gm14 No
GM18G07280 gma 18 pid=16308183;transcript=eq;prot=eq;name=Glyma18g07280.1 + Gm18 No
LJ6G004160 lja partial;prot=eq;transcript=eq;scaffold=LjT18B08;name=chr6.LjT18B08.60.nd + chr6 No
MD00G125360 mdo transcript=eq;prot=eq;pid=MDP0000148820;tid=MDP0000148820;contig=MDC005328.597 - MDC005328.597 No
MD03G005540 mdo transcript=eq;prot=eq;pid=MDP0000241759;tid=MDP0000241759;contig=MDC012905.395 - 3 No
MD11G006550 mdo transcript=eq;prot=eq;pid=MDP0000468286;tid=MDP0000468286;contig=MDC012428.223 - 11 No
ME03150G00450 mes PACid=17991945;RNAname=cassava4.1_001825m;GeneName=cassava4.1_001825m.g;transcript=eq;prot=eq - scaffold03150 No
ME06512G02660 mes PACid=17966409;RNAname=cassava4.1_001767m;GeneName=cassava4.1_001767m.g;transcript=eq;prot=eq - scaffold06512 No
MRCC299_07G02640 mrcc299 name=EuGene.0700010264;pid=59979;prot=eq;tid=59979;transcript=eq + Chr_07 No
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