Sub-family  

Parent family
HOM000732
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family ORTHO001776 has 35 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 35 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G08410 aly name=fgenesh2_kg.1__903__AT1G08760.1;pid=470949;prot=eq;tid=470949 + scaffold_1 No
AT1G08760 ath Plant protein of unknown function (DUF936); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT3G14170.1); Has 718 Blast hits to 418 proteins in 99 species: Archae - 0; Bacteria - 149; Metazoa - 50; Fungi - 25; Plants - 280; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink).;Plant protein of unknown function (DUF936) transcript=eq;prot=eq; + 1 No
BD3G41830 bdi pid=Bradi3g41830.1;tid=Bradi3g41830.1;GeneName=Bradi3g41830;transcript=eq;prot=eq - Bd3 No
BD4G35280 bdi pid=Bradi4g35280.1;tid=Bradi4g35280.1;GeneName=Bradi4g35280;transcript=eq;prot=eq - Bd4 No
CP00009G03100 cpa name=evm.TU.supercontig_9.310;pid=evm.TU.supercontig_9.310;prot=eq;transcript=eq - supercontig_9 No
FV7G03760 fve Myb-like protein H (probable) transcript=eq;prot=eq;pid=gene18567 + LG7 No
GM11G13450 gma 11 pid=16283753;transcript=eq;prot=eq;name=Glyma11g13450.1 + Gm11 No
GM12G05450 gma 12 pid=16286503;transcript=eq;prot=eq;name=Glyma12g05450.1 + Gm12 No
GM13G42080 gma 13 pid=16293487;transcript=eq;prot=eq;name=Glyma13g42080.1 - Gm13 No
GM15G03310 gma 15 pid=16297475;transcript=eq;prot=eq;name=Glyma15g03310.1 + Gm15 No
LJ3G001920 lja prot=eq;transcript=eq;scaffold=CM0106;name=chr3.CM0106.480.nd - chr3 No
LJ3G032340 lja prot=eq;transcript=eq;scaffold=LjT29G18;name=chr3.LjT29G18.40.nd + chr3 No
MD04G000720 mdo transcript=eq;prot=eq;pid=MDP0000648669;tid=MDP0000648669;contig=MDC021467.174 - 4 No
MD17G014100 mdo transcript=eq;prot=eq;pid=MDP0000254432;tid=MDP0000254432;contig=MDC021467.177 - 17 No
ME06155G00040 mes PACid=17967103;RNAname=cassava4.1_002456m;GeneName=cassava4.1_002456m.g;transcript=eq;prot=eq + scaffold06155 No
ME09798G00040 mes PACid=17982073;RNAname=cassava4.1_026544m;GeneName=cassava4.1_026544m.g;transcript=eq;prot=eq + scaffold09798 No
MT4G068050 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR010341 Protein of unknown function DUF936, plant transcript=eq;prot=eq;pid=Medtr4g068050.1; + 4 No
OS08G42870 osa expressed protein transcript=eq;prot=eq; - 8 No
OS09G34110 osa expressed protein transcript=eq;prot=eq; - 9 No
OSINDICA_08G41500 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC027469; - Chr08 No
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