Sub-family  

Parent family
HOM001261
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO001750 has 36 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 36 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G28090 aly name=fgenesh2_kg.8__2167__AT5G61820.1;pid=496351;prot=eq;tid=496351 - scaffold_8 No
AT5G61820 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
BD3G41600 bdi pid=Bradi3g41600.1;tid=Bradi3g41600.1;GeneName=Bradi3g41600;transcript=eq;prot=eq + Bd3 No
BD3G41620 bdi pid=Bradi3g41620.1;tid=Bradi3g41620.1;GeneName=Bradi3g41620;transcript=eq;prot=eq + Bd3 No
CP00013G01780 cpa name=evm.TU.supercontig_13.178;pid=evm.TU.supercontig_13.178;prot=eq;transcript=eq + supercontig_13 No
FV5G32820 fve Biotin synthase (probable) transcript=eq;prot=eq;pid=gene33420 + LG5 No
FV5G32830 fve Biotin synthase (probable) transcript=eq;prot=eq;pid=gene33421 + LG5 No
GM05G25690 gma 05 pid=16259608;transcript=eq;prot=eq;name=Glyma05g25690.1 + Gm05 No
GM05G25700 gma 05 pid=16259609;transcript=eq;prot=eq;name=Glyma05g25700.1 - Gm05 No
GM08G08660 gma 08 pid=16270439;transcript=eq;prot=eq;name=Glyma08g08660.1 - Gm08 No
GM09G02910 gma 09 pid=16274588;transcript=eq;prot=eq;name=Glyma09g02910.1 + Gm09 No
GM15G13870 gma 15 pid=16298706;transcript=eq;prot=eq;name=Glyma15g13870.1 + Gm15 No
GM15G13880 gma 15 pid=16298707;transcript=eq;prot=eq;name=Glyma15g13880.1 + Gm15 No
LJ4G003560 lja prot=eq;transcript=eq;scaffold=CM0007;name=chr4.CM0007.1040.nc + chr4 No
LJ4G003570 lja prot=eq;transcript=eq;scaffold=CM0007;name=chr4.CM0007.1050.nc + chr4 No
LJ6G012520 lja prot=eq;transcript=eq;scaffold=CM0437;name=chr6.CM0437.70.nd + chr6 No
MD07G004300 mdo transcript=eq;prot=eq;pid=MDP0000324427;tid=MDP0000324427;contig=MDC007227.139 + 7 No
ME01701G00860 mes PACid=17965046;RNAname=cassava4.1_006954m;GeneName=cassava4.1_006954m.g;transcript=eq;prot=eq + scaffold01701 No
MT2G030460 mtr MtN19 protein (AHRD V1 ***- O24097_MEDTR); contains Interpro domain(s) IPR011692 Stress up-regulated Nod 19 transcript=eq;prot=eq;pid=Medtr2g030460.1; + 2 No
MT2G030470 mtr MtN19 protein (AHRD V1 *-*- O24097_MEDTR); contains Interpro domain(s) IPR011692 Stress up-regulated Nod 19 transcript=eq;prot=eq;pid=Medtr2g030470.1; + 2 No
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