Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (7 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)



The gene family ORTHO001584 has 37 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 37 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G13800 aly name=fgenesh1_pm.C_scaffold_5000775;pid=323231;prot=eq;tid=323231 + scaffold_5 No
AL5G13810 aly name=fgenesh1_pg.C_scaffold_5001044;pid=347652;prot=eq;tid=347652 + scaffold_5 No
AL5G13820 aly name=fgenesh2_kg.5__943__AT3G45680.1;pid=484951;prot=eq;tid=484951 + scaffold_5 No
AL5G13880 aly name=fgenesh2_kg.5__945__AT3G45690.1;pid=484953;prot=eq;tid=484953 + scaffold_5 No
AL5G13900 aly name=Al_scaffold_0005_1339;pid=865860;prot=eq;tid=897373 + scaffold_5 No
AT3G45650 ath Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.;nitrate excretion transporter1 transcript=eq;prot=eq; + 3 No
AT3G45660 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate excretion transporter1 (TAIR:AT3G45650.1); Has 4308 Blast hits to 4237 proteins in 696 species: Archae - 0; Bacteria - 1162; Metazoa - 465; Fungi - 314; Plants - 2110; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 3 No
AT3G45680 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3869 Blast hits to 3768 proteins in 536 species: Archae - 0; Bacteria - 851; Metazoa - 459; Fungi - 223; Plants - 2137; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 3 No
AT3G45690 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45680.1); Has 4047 Blast hits to 3993 proteins in 551 species: Archae - 0; Bacteria - 1139; Metazoa - 429; Fungi - 192; Plants - 2074; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 3 No
AT3G45700 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3331 Blast hits to 3241 proteins in 427 species: Archae - 0; Bacteria - 506; Metazoa - 449; Fungi - 129; Plants - 2109; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 3 No
AT3G45710 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45700.1); Has 3682 Blast hits to 3580 proteins in 536 species: Archae - 2; Bacteria - 690; Metazoa - 461; Fungi - 187; Plants - 2116; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 3 No
AT3G45720 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45680.1); Has 4336 Blast hits to 4242 proteins in 649 species: Archae - 2; Bacteria - 1337; Metazoa - 453; Fungi - 208; Plants - 2079; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 3 No
BD2G27987 bdi pid=Bradi2g27987.1;tid=Bradi2g27987.1;GeneName=Bradi2g27987;transcript=eq;prot=eq + Bd2 No
CP00139G00490 cpa name=evm.TU.supercontig_139.49;pid=evm.TU.supercontig_139.49;prot=eq;transcript=eq + supercontig_139 No
CP00139G00550 cpa name=evm.TU.supercontig_139.55;pid=evm.TU.supercontig_139.55;prot=eq;transcript=eq + supercontig_139 No
FV3G30120 fve Probable peptide transporter At1g52190 transcript=eq;prot=eq;pid=gene25387 - LG3 No
FV3G30140 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene25389 - LG3 No
GM13G40450 gma 13 pid=16293284;transcript=eq;prot=eq;name=Glyma13g40450.1 - Gm13 No
MD00G390740 mdo transcript=eq;prot=eq;pid=MDP0000307459;tid=MDP0000307459;contig=MDC017704.389 + MDC017704.389 No
MD00G392530 mdo transcript=eq;prot=eq;pid=MDP0000243825;tid=MDP0000243825;contig=MDC017800.86 + MDC017800.86 No
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