Sub-family 
- Id
- ORTHO001584
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000031
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (5 genes)
- ath
- Arabidopsis thaliana (7 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (2 genes)
- fve
- Fragaria vesca (2 genes)
- gma
- Glycine max (1 gene)
- mdo
- Malus domestica (4 genes)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (3 genes)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (2 genes)
- vvi
- Vitis vinifera (2 genes)
The gene family ORTHO001584 has 37 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO001584
Page 1 of 2, showing 20 records out of 37 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL5G13800 | aly | name=fgenesh1_pm.C_scaffold_5000775;pid=323231;prot=eq;tid=323231 | + | scaffold_5 | No | |
| AL5G13810 | aly | name=fgenesh1_pg.C_scaffold_5001044;pid=347652;prot=eq;tid=347652 | + | scaffold_5 | No | |
| AL5G13820 | aly | name=fgenesh2_kg.5__943__AT3G45680.1;pid=484951;prot=eq;tid=484951 | + | scaffold_5 | No | |
| AL5G13880 | aly | name=fgenesh2_kg.5__945__AT3G45690.1;pid=484953;prot=eq;tid=484953 | + | scaffold_5 | No | |
| AL5G13900 | aly | name=Al_scaffold_0005_1339;pid=865860;prot=eq;tid=897373 | + | scaffold_5 | No | |
| AT3G45650 | ath | Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.;nitrate excretion transporter1 | transcript=eq;prot=eq; | + | 3 | No |
| AT3G45660 | ath | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate excretion transporter1 (TAIR:AT3G45650.1); Has 4308 Blast hits to 4237 proteins in 696 species: Archae - 0; Bacteria - 1162; Metazoa - 465; Fungi - 314; Plants - 2110; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).;Major facilitator superfamily protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G45680 | ath | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3869 Blast hits to 3768 proteins in 536 species: Archae - 0; Bacteria - 851; Metazoa - 459; Fungi - 223; Plants - 2137; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).;Major facilitator superfamily protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G45690 | ath | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45680.1); Has 4047 Blast hits to 3993 proteins in 551 species: Archae - 0; Bacteria - 1139; Metazoa - 429; Fungi - 192; Plants - 2074; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).;Major facilitator superfamily protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G45700 | ath | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3331 Blast hits to 3241 proteins in 427 species: Archae - 0; Bacteria - 506; Metazoa - 449; Fungi - 129; Plants - 2109; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).;Major facilitator superfamily protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G45710 | ath | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45700.1); Has 3682 Blast hits to 3580 proteins in 536 species: Archae - 2; Bacteria - 690; Metazoa - 461; Fungi - 187; Plants - 2116; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).;Major facilitator superfamily protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G45720 | ath | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45680.1); Has 4336 Blast hits to 4242 proteins in 649 species: Archae - 2; Bacteria - 1337; Metazoa - 453; Fungi - 208; Plants - 2079; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).;Major facilitator superfamily protein | transcript=eq;prot=eq; | + | 3 | No |
| BD2G27987 | bdi | pid=Bradi2g27987.1;tid=Bradi2g27987.1;GeneName=Bradi2g27987;transcript=eq;prot=eq | + | Bd2 | No | |
| CP00139G00490 | cpa | name=evm.TU.supercontig_139.49;pid=evm.TU.supercontig_139.49;prot=eq;transcript=eq | + | supercontig_139 | No | |
| CP00139G00550 | cpa | name=evm.TU.supercontig_139.55;pid=evm.TU.supercontig_139.55;prot=eq;transcript=eq | + | supercontig_139 | No | |
| FV3G30120 | fve | Probable peptide transporter At1g52190 | transcript=eq;prot=eq;pid=gene25387 | - | LG3 | No |
| FV3G30140 | fve | Peptide transporter PTR1 (probable) | transcript=eq;prot=eq;pid=gene25389 | - | LG3 | No |
| GM13G40450 | gma | 13 | pid=16293284;transcript=eq;prot=eq;name=Glyma13g40450.1 | - | Gm13 | No |
| MD00G390740 | mdo | transcript=eq;prot=eq;pid=MDP0000307459;tid=MDP0000307459;contig=MDC017704.389 | + | MDC017704.389 | No | |
| MD00G392530 | mdo | transcript=eq;prot=eq;pid=MDP0000243825;tid=MDP0000243825;contig=MDC017800.86 | + | MDC017800.86 | No |