Sub-family  

Parent family
HOM000032
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO001542 has 37 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 37 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G24770 aly name=scaffold_202533.1;pid=895459;prot=eq;tid=926972 + scaffold_2 No
AL7G05940 aly name=fgenesh2_kg.7__588__AT4G35020.1;pid=491155;prot=eq;tid=491155 - scaffold_7 No
AT1G75840 ath Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.;RAC-like GTP binding protein 5 transcript=eq;prot=eq; + 1 No
AT3G51300 ath Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.;RHO-related protein from plants 1 transcript=eq;prot=eq; + 3 No
AT4G35020 ath A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.;RAC-like 3 transcript=eq;prot=eq; + 4 No
BD3G01930 bdi GTPase activity (Blast2GO) pid=Bradi3g01930.1;tid=Bradi3g01930.1;GeneName=Bradi3g01930;transcript=eq;prot=eq - Bd3 No
BD3G60900 bdi GTPase activity (Blast2GO) pid=Bradi3g60900.1;tid=Bradi3g60900.1;GeneName=Bradi3g60900;transcript=eq;prot=eq + Bd3 No
CP00026G03050 cpa name=evm.TU.supercontig_26.305;pid=evm.TU.supercontig_26.305;prot=eq;transcript=eq - supercontig_26 No
FV2G07360 fve Rac-like GTP-binding protein ARAC5, Precursor (similar to) transcript=eq;prot=eq;pid=gene07653 + LG2 No
GM04G02530 gma 04 pid=16254607;transcript=eq;prot=eq;name=Glyma04g02530.1 - Gm04 No
GM06G02580 gma 06 pid=16261474;transcript=eq;prot=eq;name=Glyma06g02580.1 - Gm06 No
GM11G11510 gma 11 pid=16283511;transcript=eq;prot=eq;name=Glyma11g11510.1 + Gm11 No
GM12G03660 gma 12 pid=16286274;transcript=eq;prot=eq;name=Glyma12g03660.1 + Gm12 No
LJ1G033560 lja prot=eq;transcript=eq;scaffold=CM0017;name=chr1.CM0017.770.nd + chr1 No
MD00G390660 mdo transcript=eq;prot=eq;pid=MDP0000090045;tid=MDP0000090045;contig=MDC017703.189 + MDC017703.189 No
ME01481G00010 mes PACid=17981406;RNAname=cassava4.1_016681m;GeneName=cassava4.1_016681m.g;transcript=eq;prot=eq - scaffold01481 No
MT4G073250 mtr Rac-like GTP-binding protein 6 (AHRD V1 **** B6THA6_MAIZE); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho type transcript=eq;prot=eq;pid=Medtr4g073250.1; - 4 No
OS02G02840 osa ras%2Drelated protein, putative, expressed transcript=eq;prot=eq; - 2 No
OS02G58730 osa ras%2Drelated protein, putative, expressed transcript=eq;prot=eq; + 2 No
OSINDICA_02G56820 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC015978; + Chr02 No
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