Sub-family  

Parent family
HOM000017
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO001439 has 38 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G03230 aly name=fgenesh2_kg.3__326__AT3G03770.1;pid=477625;prot=eq;tid=477625 - scaffold_3 No
AT3G03770 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1); Has 99971 Blast hits to 58260 proteins in 1687 species: Archae - 62; Bacteria - 4595; Metazoa - 21933; Fungi - 2176; Plants - 63736; Viruses - 96; Other Eukaryotes - 7373 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 3 No
BD1G06100 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-VI pid=Bradi1g06100.1;tid=Bradi1g06100.1;GeneName=Bradi1g06100;transcript=eq;prot=eq - Bd1 No
BD1G56540 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-VI pid=Bradi1g56540.2;tid=Bradi1g56540.2;GeneName=Bradi1g56540;transcript=eq;prot=eq - Bd1 No
CP00054G00520 cpa name=evm.TU.supercontig_54.52;pid=evm.TU.supercontig_54.52;prot=eq;transcript=eq + supercontig_54 No
CP00161G00210 cpa name=evm.TU.supercontig_161.21;pid=evm.TU.supercontig_161.21;prot=eq;transcript=eq + supercontig_161 No
FV0G49880 fve Probable LRR receptor-like serine/threonine-protein kinase At1g14390, Precursor transcript=eq;prot=eq;pid=gene24460 + scf0513033 No
FV7G00260 fve Probable LRR receptor-like serine/threonine-protein kinase At1g14390, Precursor transcript=eq;prot=eq;pid=gene00364 + LG7 No
GM16G04130 gma 16 pid=16301413;transcript=eq;prot=eq;name=Glyma16g04130.1 - Gm16 No
GM17G24070 gma 17 pid=16306371;transcript=eq;prot=eq;name=Glyma17g24070.1 - Gm17 No
GM19G29370 gma 19 pid=16313178;transcript=eq;prot=eq;name=Glyma19g29370.1 + Gm19 No
LJ1G042040 lja prot=eq;transcript=eq;scaffold=LjT38H23;name=chr1.LjT38H23.110.nd + chr1 No
MD00G294470 mdo transcript=eq;prot=eq;pid=MDP0000195256;tid=MDP0000195256;contig=MDC012560.368 - MDC012560.368 No
MD07G017310 mdo transcript=eq;prot=eq;pid=MDP0000189315;tid=MDP0000189315;contig=MDC009561.700 + 7 No
MD14G000490 mdo transcript=eq;prot=eq;pid=MDP0000322059;tid=MDP0000322059;contig=MDC007315.261 + 14 No
ME03614G01970 mes PACid=17965569;RNAname=cassava4.1_002782m;GeneName=cassava4.1_002782m.g;transcript=ne;prot=eq - scaffold03614 No
ME09387G00060 mes PACid=17963973;RNAname=cassava4.1_002020m;GeneName=cassava4.1_002020m.g;transcript=eq;prot=eq - scaffold09387 No
MT7G086420 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR001245 Tyrosine protein kinase transcript=eq;prot=eq;pid=Medtr7g086420.1; + 7 No
OS03G57780 osa protein kinase, putative, expressed transcript=eq;prot=eq; + 3 No
OS07G07230 osa protein kinase, putative, expressed transcript=eq;prot=eq; + 7 No
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