Sub-family  

Parent family
HOM000846
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO001431 has 38 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G50300 aly name=scaffold_105361.1;pid=892567;prot=eq;tid=924080 - scaffold_1 No
AL3G13860 aly name=scaffold_301529.1;pid=897559;prot=eq;tid=929072 + scaffold_3 No
AL8G21640 aly name=Al_scaffold_0008_2062;pid=885798;prot=eq;tid=917311 + scaffold_8 No
AT1G55680 ath Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 20114 Blast hits to 9589 proteins in 506 species: Archae - 80; Bacteria - 6727; Metazoa - 4776; Fungi - 4188; Plants - 1687; Viruses - 0; Other Eukaryotes - 2656 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; - 1 No
AT3G13340 ath Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1); Has 21298 Blast hits to 10067 proteins in 523 species: Archae - 80; Bacteria - 6953; Metazoa - 5235; Fungi - 4425; Plants - 1789; Viruses - 0; Other Eukaryotes - 2816 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; + 3 No
AT5G56190 ath Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; + 5 No
BD1G42960 bdi ATPase activity, coupled (Blast2GO) pid=Bradi1g42960.1;tid=Bradi1g42960.1;GeneName=Bradi1g42960;transcript=eq;prot=eq - Bd1 No
BD3G56640 bdi ATPase activity, coupled (Blast2GO) pid=Bradi3g56640.1;tid=Bradi3g56640.1;GeneName=Bradi3g56640;transcript=eq;prot=eq + Bd3 No
CP00012G00730 cpa name=evm.TU.supercontig_12.73;pid=evm.TU.supercontig_12.73;prot=eq;transcript=eq - supercontig_12 No
FV3G34650 fve hypothetical protein transcript=eq;prot=eq;pid=gene01440 - LG3 No
GM04G12500 gma 04 pid=16255746;transcript=eq;prot=eq;name=Glyma04g12500.1 + Gm04 No
GM07G40060 gma 07 pid=16269349;transcript=eq;prot=eq;name=Glyma07g40060.1 + Gm07 No
GM09G02070 gma 09 pid=16274492;transcript=eq;prot=eq;name=Glyma09g02070.1 + Gm09 No
GM15G12980 gma 15 pid=16298606;transcript=eq;prot=eq;name=Glyma15g12980.1 + Gm15 No
GM17G00740 gma 17 pid=16303949;transcript=eq;prot=eq;name=Glyma17g00740.1 - Gm17 No
LJ3G019060 lja prot=eq;transcript=eq;scaffold=CM0047;name=chr3.CM0047.460.nc + chr3 No
MD00G072840 mdo transcript=eq;prot=eq;pid=MDP0000146174;tid=MDP0000146174;contig=MDC003021.376 + MDC003021.376 No
MD00G129010 mdo transcript=eq;prot=eq;pid=MDP0000257364;tid=MDP0000257364;contig=MDC005487.407 + MDC005487.407 No
MD00G241080 mdo transcript=eq;prot=eq;pid=MDP0000819240;tid=MDP0000819240;contig=MDC010441.399 - MDC010441.399 No
MD03G003190 mdo transcript=eq;prot=eq;pid=MDP0000770904;tid=MDP0000770904;contig=MDC010441.402 + 3 No
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