Sub-family  

Parent family
HOM002471
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO001409 has 38 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G17100 aly name=fgenesh2_kg.1__1775__AT1G16240.3;pid=471821;prot=eq;tid=471821 - scaffold_1 No
AL2G28640 aly name=fgenesh2_kg.2__2261__AT1G79590.2;pid=477131;prot=eq;tid=477131 + scaffold_2 No
AT1G16240 ath Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.;syntaxin of plants 51 transcript=eq;prot=eq; - 1 No
AT1G79590 ath Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.;syntaxin of plants 52 transcript=eq;prot=eq; + 1 No
BD3G01760 bdi phosphatidylinositol 3-phosphate binding (Blast2GO) pid=Bradi3g01760.1;tid=Bradi3g01760.1;GeneName=Bradi3g01760;transcript=eq;prot=eq - Bd3 No
BD3G19690 bdi phosphatidylinositol 3-phosphate binding (Blast2GO) pid=Bradi3g19690.3;tid=Bradi3g19690.3;GeneName=Bradi3g19690;transcript=eq;prot=eq - Bd3 No
CP00012G02470 cpa name=evm.TU.supercontig_12.247;pid=evm.TU.supercontig_12.247;prot=eq;transcript=eq - supercontig_12 No
CR17G02800 cre name=estExt_fgenesh2_pg.C_130061;pid=189016;prot=eq;tid=189016;transcript=eq - chromosome_17 No
GM08G43480 gma 08 pid=16273704;transcript=eq;prot=eq;name=Glyma08g43480.1 + Gm08 No
GM14G02120 gma 14 pid=16294050;transcript=eq;prot=eq;name=Glyma14g02120.1 - Gm14 No
GM18G10060 gma 18 pid=16308451;transcript=eq;prot=eq;name=Glyma18g10060.1 - Gm18 No
LJ2G038230 lja prot=eq;transcript=eq;scaffold=LjT03I05;name=chr2.LjT03I05.10.nc + chr2 No
MD00G003200 mdo transcript=eq;prot=eq;pid=MDP0000001088;tid=MDP0000001088;contig=MDC000137.316 - MDC000137.316 No
MD00G036590 mdo transcript=eq;prot=eq;pid=MDP0000546160;tid=MDP0000546160;contig=MDC001552.74 - MDC001552.74 No
MD00G111790 mdo transcript=eq;prot=eq;pid=MDP0000588783;tid=MDP0000588783;contig=MDC004759.111 + MDC004759.111 No
MD00G474200 mdo transcript=eq;prot=eq;pid=MDP0000143333;tid=MDP0000143333;contig=MDC022038.268 - MDC022038.268 No
MD11G017260 mdo transcript=eq;prot=eq;pid=MDP0000363658;tid=MDP0000363658;contig=MDC004759.122 - 11 No
ME03332G00200 mes PACid=17967501;RNAname=cassava4.1_015282m;GeneName=cassava4.1_015286m.g;transcript=eq;prot=eq - scaffold03332 No
MRCC299_09G04650 mrcc299 name=EuGene.0900010457;pid=61474;prot=eq;tid=61474;transcript=eq - Chr_09 No
MT3G055200 mtr Syntaxin-52 (AHRD V1 ***- Q94KK7); contains Interpro domain(s) IPR000727 Target SNARE coiled-coil region transcript=eq;prot=eq;pid=Medtr3g055200.1; + 3 No
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