Sub-family  

Parent family
HOM000005
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (3 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family ORTHO001398 has 38 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G01160 aly name=fgenesh1_pm.C_scaffold_1000095;pid=311315;prot=eq;tid=311315 + scaffold_1 No
AL4G34800 aly name=fgenesh2_kg.4__2890__AT2G46660.1;pid=483830;prot=eq;tid=483830 - scaffold_4 No
AL5G32810 aly name=scaffold_503451.1;pid=907747;prot=eq;tid=939260 - scaffold_5 No
AT1G01190 ath member of CYP78A;cytochrome P450, family 78, subfamily A, polypeptide 8 transcript=eq;prot=eq; - 1 No
AT2G46660 ath member of CYP78A;cytochrome P450, family 78, subfamily A, polypeptide 6 transcript=eq;prot=eq; - 2 No
AT3G61880 ath Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.;cytochrome p450 78a9 transcript=eq;prot=eq; - 3 No
BD3G42180 bdi pid=Bradi3g42180.1;tid=Bradi3g42180.1;GeneName=Bradi3g42180;transcript=eq;prot=eq - Bd3 No
BD4G35890 bdi pid=Bradi4g35890.1;tid=Bradi4g35890.1;GeneName=Bradi4g35890;transcript=eq;prot=eq - Bd4 No
CP00144G00080 cpa name=evm.TU.supercontig_144.8;pid=evm.TU.supercontig_144.8;prot=eq;transcript=eq + supercontig_144 No
FV0G41910 fve Cytochrome P450 78A3 (putative) transcript=eq;prot=eq;pid=gene01896 + scf0512956 No
FV7G04740 fve Cytochrome P450 78A3 (putative) transcript=eq;prot=eq;pid=gene18659 + LG7 No
GM07G05820 gma 07 pid=16266335;transcript=eq;prot=eq;name=Glyma07g05820.1 + Gm07 No
GM16G02400 gma 16 pid=16301211;transcript=eq;prot=eq;name=Glyma16g02400.1 + Gm16 No
GM19G44790 gma 19 pid=16314959;transcript=eq;prot=eq;name=Glyma19g44790.1 - Gm19 No
MD00G353810 mdo transcript=eq;prot=eq;pid=MDP0000140803;tid=MDP0000140803;contig=MDC015847.429 - MDC015847.429 No
MD06G010820 mdo transcript=eq;prot=eq;pid=MDP0000151762;tid=MDP0000151762;contig=MDC012901.372 - 6 No
MD13G011270 mdo transcript=eq;prot=eq;pid=MDP0000762034;tid=MDP0000762034;contig=MDC005738.229 + 13 No
ME00977G00050 mes PACid=17959982;RNAname=cassava4.1_006166m;GeneName=cassava4.1_006166m.g;transcript=eq;prot=eq - scaffold00977 No
ME03581G00380 mes PACid=17975591;RNAname=cassava4.1_005429m;GeneName=cassava4.1_005429m.g;transcript=eq;prot=eq + scaffold03581 No
ME03846G00010 mes PACid=17972582;RNAname=cassava4.1_005428m;GeneName=cassava4.1_005428m.g;transcript=eq;prot=eq - scaffold03846 No
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