Sub-family  

Parent family
HOM001299
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO001220 has 40 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 40 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G18200 aly name=scaffold_101927.1;pid=889133;prot=eq;tid=920646 + scaffold_1 No
AL2G21140 aly name=fgenesh2_kg.2__1492__AT1G72330.1;pid=476362;prot=eq;tid=476362 + scaffold_2 No
AT1G17290 ath Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia;alanine aminotransferas transcript=eq;prot=eq; + 1 No
AT1G72330 ath Encodes for alanine aminotransferase ALAAT2.;alanine aminotransferase 2 transcript=eq;prot=eq; + 1 No
BD1G20995 bdi pid=Bradi1g20995.1;tid=Bradi1g20995.1;GeneName=Bradi1g20995;transcript=eq;prot=eq - Bd1 No
BD3G23160 bdi alanine transaminase activity (Blast2GO) pid=Bradi3g23160.1;tid=Bradi3g23160.1;GeneName=Bradi3g23160;transcript=eq;prot=eq + Bd3 No
BD5G20427 bdi pid=Bradi5g20427.2;tid=Bradi5g20427.2;GeneName=Bradi5g20427;transcript=eq;prot=eq + Bd5 No
CP00025G01930 cpa name=evm.TU.supercontig_25.193;pid=evm.TU.supercontig_25.193;prot=eq;transcript=eq - supercontig_25 No
FV0G16960 fve Alanine aminotransferase 2 (ALAAT-2) (similar to) transcript=eq;prot=eq;pid=gene05462 - scf0513160 No
GM07G05130 gma 07 pid=16266243;transcript=eq;prot=eq;name=Glyma07g05130.1 - Gm07 No
GM16G01630 gma 16 pid=16301114;transcript=eq;prot=eq;name=Glyma16g01630.1 - Gm16 No
LJ0G088350 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_029017;name=LjSGA_029017.1 + LjSGA_029017 No
MD00G110400 mdo transcript=eq;prot=eq;pid=MDP0000319263;tid=MDP0000319263;contig=MDC004699.471 + MDC004699.471 No
MD09G016590 mdo transcript=eq;prot=eq;pid=MDP0000168683;tid=MDP0000168683;contig=MDC004699.467 + 9 No
ME05875G01560 mes PACid=17973117;RNAname=cassava4.1_006577m;GeneName=cassava4.1_006577m.g;transcript=eq;prot=eq - scaffold05875 No
ME10504G00300 mes PACid=17970196;RNAname=cassava4.1_005265m;GeneName=cassava4.1_005265m.g;transcript=eq;prot=eq + scaffold10504 No
MRCC299_02G02040 mrcc299 name=estExt_Genewise2.C_Chr_020893;pid=90107;prot=eq;tid=90107;transcript=eq - Chr_02 No
MT8G023140 mtr Alanine aminotransferase 1 (AHRD V1 **** A8IKE1_SOYBN); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II transcript=eq;prot=eq;pid=Medtr8g023140.1; - 8 No
OL03G02840 olu NULL name=eugene.0300010288,pid=30612,prot=eq,tid=30612 - Chr_3 No
OS03G08530 osa aminotransferase, classes I and II, domain containing protein, expressed transcript=eq;prot=eq; - 3 No
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