Sub-family  

Parent family
HOM000668
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (9 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO001174 has 41 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G18130 aly name=scaffold_401863.1;pid=902362;prot=eq;tid=933875 + scaffold_4 No
AT2G32950 ath Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; + 2 No
BD3G57667 bdi pid=Bradi3g57667.1;tid=Bradi3g57667.1;GeneName=Bradi3g57667;transcript=eq;prot=eq + Bd3 No
CP00152G00600 cpa name=evm.TU.supercontig_152.60;pid=evm.TU.supercontig_152.60;prot=eq;transcript=eq - supercontig_152 No
CP00970G00010 cpa name=evm.TU.supercontig_970.1;pid=evm.TU.supercontig_970.1;prot=eq;transcript=eq - supercontig_970 No
FV0G30320 fve E3 ubiquitin-protein ligase COP1 (similar to) transcript=eq;prot=eq;pid=gene14041 - scf0513178 No
FV3G01890 fve E3 ubiquitin-protein ligase COP1 (putative) transcript=eq;prot=eq;pid=gene19736 - LG3 No
GM02G43540 gma 02 pid=16250034;transcript=eq;prot=eq;name=Glyma02g43540.1 + Gm02 No
GM14G05430 gma 14 pid=16294447;transcript=eq;prot=eq;name=Glyma14g05430.1 - Gm14 No
LJ2G034990 lja partial;prot=eq;transcript=eq;scaffold=LjT24P12;name=chr2.LjT24P12.10.nd - chr2 No
MD00G280290 mdo transcript=eq;prot=eq;pid=MDP0000241199;tid=MDP0000241199;contig=MDC011994.251 - MDC011994.251 No
MD00G309190 mdo transcript=eq;prot=eq;pid=MDP0000197296;tid=MDP0000197296;contig=MDC013131.223 + MDC013131.223 No
MD00G434350 mdo transcript=eq;prot=eq;pid=MDP0000131371;tid=MDP0000131371;contig=MDC019880.25 - MDC019880.25 No
MD00G446140 mdo transcript=eq;prot=eq;pid=MDP0000245133;tid=MDP0000245133;contig=MDC020470.183 - MDC020470.183 No
MD10G027110 mdo transcript=eq;prot=eq;pid=MDP0000195882;tid=MDP0000195882;contig=MDC015139.29 - 10 No
ME05214G00450 mes PACid=17993849;RNAname=cassava4.1_002986m;GeneName=cassava4.1_002986m.g;transcript=eq;prot=eq + scaffold05214 No
MRCC299_01G06900 mrcc299 name=EuGene.0100010738;pid=55511;prot=eq;tid=55511;transcript=eq + Chr_01 No
MT5G085250 mtr E3 ubiquitin-protein ligase COP1 (AHRD V1 *-** P93471); contains Interpro domain(s) IPR017986 WD40 repeat, region transcript=eq;prot=eq;pid=Medtr5g085250.1; + 5 No
OL03G04970 olu NULL name=e_gwEuk.3.319.1,pid=33818,prot=eq,tid=33818 - Chr_3 No
OS02G53140 osa COP1, putative, expressed transcript=eq;prot=eq; - 2 No
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