Sub-family  

Parent family
HOM000110
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO001152 has 41 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G26200 aly name=fgenesh1_pg.C_scaffold_2001986;pid=339887;prot=eq;tid=339887 - scaffold_2 No
AL4G26270 aly name=fgenesh2_kg.4__2061__AT2G39750.1;pid=483001;prot=eq;tid=483001 - scaffold_4 No
AL6G05640 aly name=fgenesh2_kg.6__540__AT5G06050.1;pid=487406;prot=eq;tid=487406 + scaffold_6 No
AT1G77260 ath S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 919 Blast hits to 909 proteins in 49 species: Archae - 0; Bacteria - 17; Metazoa - 3; Fungi - 4; Plants - 891; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).;S-adenosyl-L-methionine-dependent methyltransferases superfamily protein transcript=eq;prot=eq; - 1 No
AT2G39750 ath S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink).;S-adenosyl-L-methionine-dependent methyltransferases superfamily protein transcript=eq;prot=eq; - 2 No
AT5G06050 ath Putative methyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Putative methyltransferase family protein transcript=eq;prot=eq; + 5 No
BD2G54840 bdi Putative Pectin MethylTransferase pid=Bradi2g54840.1;tid=Bradi2g54840.1;GeneName=Bradi2g54840;Name=BdPMT;transcript=eq;prot=eq - Bd2 No
CP00019G02660 cpa name=evm.TU.supercontig_19.267;pid=evm.TU.supercontig_19.267;prot=eq;transcript=eq + supercontig_19 No
CP00064G01490 cpa name=evm.TU.supercontig_64.149;pid=evm.TU.supercontig_64.149;prot=eq;transcript=eq + supercontig_64 No
FV2G30470 fve Probable methyltransferase C20orf7 homolog, mitochondrial, Precursor transcript=eq;prot=eq;pid=gene10962 + LG2 No
FV7G25680 fve Probable methyltransferase C20orf7 homolog, mitochondrial, Precursor transcript=eq;prot=eq;pid=gene26313 + LG7 No
GM02G41770 gma 02 pid=16249831;transcript=eq;prot=eq;name=Glyma02g41770.1 - Gm02 No
GM11G34430 gma 11 pid=16285356;transcript=eq;prot=eq;name=Glyma11g34430.1 - Gm11 No
GM13G09520 gma 13 pid=16290125;transcript=eq;prot=eq;name=Glyma13g09520.1 - Gm13 No
GM14G07190 gma 14 pid=16294677;transcript=eq;prot=eq;name=Glyma14g07190.1 + Gm14 No
GM14G24900 gma 14 pid=16296002;transcript=eq;prot=eq;name=Glyma14g24900.1 + Gm14 No
GM18G03890 gma 18 pid=16307845;transcript=eq;prot=eq;name=Glyma18g03890.1 + Gm18 No
LJ1G002960 lja partial;prot=eq;transcript=eq;scaffold=CM0078;name=chr1.CM0078.10.nc - chr1 No
MD00G034950 mdo transcript=eq;prot=eq;pid=MDP0000045645;tid=MDP0000045645;contig=MDC001471.424 + MDC001471.424 No
MD01G012720 mdo transcript=eq;prot=eq;pid=MDP0000299388;tid=MDP0000299388;contig=MDC012219.65 - 1 No
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