Sub-family  

Parent family
HOM001392
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family ORTHO001149 has 41 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G07780 aly name=Al_scaffold_0002_716;pid=876122;prot=eq;tid=907635 - scaffold_2 No
AL3G38010 aly name=fgenesh2_kg.3__3314__AT2G17280.1;pid=480613;prot=eq;tid=480613 + scaffold_3 No
AL8G31160 aly name=scaffold_803164.1;pid=919764;prot=eq;tid=951277 - scaffold_8 No
AT1G58280 ath Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G64460.8); Has 412 Blast hits to 412 proteins in 84 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 152; Plants - 162; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).;Phosphoglycerate mutase family protein transcript=eq;prot=eq; - 1 No
AT2G17280 ath Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G64460.8); Has 682 Blast hits to 682 proteins in 146 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 321; Plants - 168; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).;Phosphoglycerate mutase family protein transcript=eq;prot=eq; + 2 No
AT5G64460 ath Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Phosphoglycerate mutase family protein transcript=eq;prot=eq; - 5 No
BD5G02400 bdi pid=Bradi5g02400.3;tid=Bradi5g02400.3;GeneName=Bradi5g02400;transcript=eq;prot=eq - Bd5 No
CP00020G00520 cpa name=evm.TU.supercontig_20.52;pid=evm.TU.supercontig_20.52;prot=eq;transcript=eq - supercontig_20 No
CR12G07380 cre name=estExt_fgenesh2_pg.C_310209;pid=192686;prot=eq;tid=192686;transcript=eq + chromosome_12 No
FV5G23870 fve hypothetical protein transcript=eq;prot=eq;pid=gene26894 + LG5 No
GM02G38210 gma 02 pid=16249432;transcript=eq;prot=eq;name=Glyma02g38210.1 - Gm02 No
GM04G09590 gma 04 pid=16255433;transcript=eq;prot=eq;name=Glyma04g09590.1 + Gm04 No
GM06G09680 gma 06 pid=16262338;transcript=eq;prot=eq;name=Glyma06g09680.1 + Gm06 No
GM08G06920 gma 08 pid=16270240;transcript=eq;prot=eq;name=Glyma08g06920.1 + Gm08 No
MD00G250590 mdo transcript=eq;prot=eq;pid=MDP0000189998;tid=MDP0000189998;contig=MDC010757.419 - MDC010757.419 No
MD00G432750 mdo transcript=eq;prot=eq;pid=MDP0000882886;tid=MDP0000882886;contig=MDC019772.64 - MDC019772.64 No
ME05965G00110 mes PACid=17977392;RNAname=cassava4.1_012137m;GeneName=cassava4.1_012137m.g;transcript=eq;prot=eq - scaffold05965 No
MRCC299_15G01170 mrcc299 name=est_cluster_kg.Chr_15__32__3199940:1;pid=109550;prot=eq;tid=109550;transcript=eq + Chr_15 No
MT3G111310 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR013078 Phosphoglycerate mutase transcript=eq;prot=eq;pid=Medtr3g111310.1; + 3 No
MT4G092840 mtr Phosphoglycerate mutase-like protein (AHRD V1 **-- Q8LGT9_SOYBN); contains Interpro domain(s) IPR013078 Phosphoglycerate mutase transcript=eq;prot=eq;pid=Medtr4g092840.1; + 4 No
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