Sub-family  

Parent family
HOM000961
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (1 gene)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (4 genes)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO001130 has 41 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G04270 aly name=Al_scaffold_0096_3;pid=855936;prot=eq;tid=887449 - scaffold_96 No
AL2G10390 aly name=scaffold_201058.1;pid=893984;prot=eq;tid=925497 + scaffold_2 No
ATCG00020 ath Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core;photosystem II reaction center protein A transcript=eq;prot=eq; - chloroplast No
BD4G19720 bdi pid=Bradi4g19720.1;tid=Bradi4g19720.1;GeneName=Bradi4g19720;transcript=eq;prot=eq + Bd4 No
BDCG00020 bdi psbA;PSII 32kDa protein;protein_id=ACF08621.1; transl_table=11; - chloroplast No
CP40297G00010 cpa name=evm.TU.contig_40297.1;pid=evm.TU.contig_40297.1;prot=eq;transcript=eq - contig_40297 No
CPCG00030 cpa psbA;photosystem II protein D1;protein_id=ABY86762.1; transl_table=11; - chloroplast No
CRCG00370 cre psbA;photosystem II reaction center protein D1;protein_id=DAA00922.1; transl_table=11; - chloroplast No
CRCG00830 cre psbA;photosystem II reaction center protein D1;protein_id=DAA00957.1; transl_table=11; + chloroplast No
FV0G57020 fve Photosystem Q(B) protein, Precursor (similar to) transcript=eq;prot=eq;pid=gene02738 + scf0512822 No
FV0G59020 fve Photosystem Q(B) protein, Precursor (similar to) transcript=eq;prot=eq;pid=gene32958 - scf0510824 No
GMCG00030 gma psbA;photosystem II protein D1;protein_id=ABC25105.1; transl_table=11; - chloroplast No
LJ2G012990 lja prot=eq;transcript=eq;scaffold=CM1731;name=chr2.CM1731.130.nc - chr2 No
LJ4G017300 lja prot=eq;transcript=eq;scaffold=CM0126;name=chr4.CM0126.1600.nc + chr4 No
LJCG00020 lja psbA;PSII 32 KDa protein;protein_id=BAB33176.1; transl_table=11; - chloroplast No
MD00G388570 mdo transcript=eq;prot=eq;pid=MDP0000327226;tid=MDP0000327226;contig=MDC017599.213 - MDC017599.213 No
MECG00030 mes psbA;photosystem II protein D1;protein_id=ABV66134.1; transl_table=11; - chloroplast No
MRCC299_CG00110 mrcc299 photosystem II D1 protein;protein_id=ACO55530.1; transl_table=11; + chloroplast No
MRCC299_CG00540 mrcc299 photosystem II D1 protein;protein_id=ACO55561.1; transl_table=11; - chloroplast No
MT0G09630 mtr Photosystem Q(B) protein (AHRD V1 ***- B7FIW8_MEDTR); contains Interpro domain(s) IPR005867 Photosystem II reaction centre protein PsbA/D1 transcript=eq;prot=eq;pid=AC225474_22.1; - AC225474.24 No
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