Sub-family 
- Id
- ORTHO001128
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000308
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (3 genes)
- ath
- Arabidopsis thaliana (3 genes)
- bdi
- Brachypodium distachyon (2 genes)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (4 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (3 genes)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (3 genes)
- ppa
- Physcomitrella patens (5 genes)
- ptr
- Populus trichocarpa (3 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (2 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- zma
- Zea mays (3 genes)
The gene family ORTHO001128 has 41 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO001128
Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL0G00270 | aly | name=fgenesh2_kg.9__16__AT4G13340.1;pid=497051;prot=eq;tid=497051 | - | scaffold_9 | No | |
| AL3G27830 | aly | name=Al_scaffold_0003_2692;pid=874051;prot=eq;tid=905564 | - | scaffold_3 | No | |
| AL7G24000 | aly | name=fgenesh2_kg.7__2425__AT4G18670.1;pid=492992;prot=eq;tid=492992 | + | scaffold_7 | No | |
| AT3G24480 | ath | Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink).;Leucine-rich repeat (LRR) family protein | transcript=eq;prot=eq; | - | 3 | No |
| AT4G13340 | ath | Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 637879 Blast hits to 129296 proteins in 3596 species: Archae - 1468; Bacteria - 134638; Metazoa - 215120; Fungi - 74599; Plants - 120849; Viruses - 14592; Other Eukaryotes - 76613 (source: NCBI BLink).;Leucine-rich repeat (LRR) family protein | transcript=eq;prot=eq; | + | 4 | No |
| AT4G18670 | ath | Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 60217 Blast hits to 20533 proteins in 968 species: Archae - 15; Bacteria - 2115; Metazoa - 6070; Fungi - 1014; Plants - 47629; Viruses - 97; Other Eukaryotes - 3277 (source: NCBI BLink).;Leucine-rich repeat (LRR) family protein | transcript=eq;prot=eq; | - | 4 | No |
| BD2G33930 | bdi | pid=Bradi2g33930.1;tid=Bradi2g33930.1;GeneName=Bradi2g33930;transcript=eq;prot=eq | + | Bd2 | No | |
| BD2G42477 | bdi | pid=Bradi2g42477.1;tid=Bradi2g42477.1;GeneName=Bradi2g42477;transcript=eq;prot=eq | + | Bd2 | No | |
| CP00023G01050 | cpa | name=evm.TU.supercontig_23.105;pid=evm.TU.supercontig_23.105;prot=eq;transcript=eq | + | supercontig_23 | No | |
| FV1G00770 | fve | hypothetical protein | transcript=eq;prot=eq;pid=gene02087 | - | LG1 | No |
| GM05G35330 | gma | 05 | pid=16260778;transcript=eq;prot=eq;name=Glyma05g35330.1 | - | Gm05 | No |
| GM07G09730 | gma | 07 | pid=16266782;transcript=eq;prot=eq;name=Glyma07g09730.1 | + | Gm07 | No |
| GM08G04390 | gma | 08 | pid=16269929;transcript=eq;prot=eq;name=Glyma08g04390.1 | + | Gm08 | No |
| GM09G32080 | gma | 09 | pid=16276897;transcript=eq;prot=eq;name=Glyma09g32080.1 | - | Gm09 | No |
| LJ4G034920 | lja | prot=eq;transcript=eq;scaffold=CM0042;name=chr4.CM0042.240.nc | + | chr4 | No | |
| MD00G109510 | mdo | transcript=eq;prot=eq;pid=MDP0000148414;tid=MDP0000148414;contig=MDC004665.236 | - | MDC004665.236 | No | |
| ME04360G00190 | mes | PACid=17970313;RNAname=cassava4.1_026156m;GeneName=cassava4.1_026156m.g;transcript=ne;prot=eq | + | scaffold04360 | No | |
| ME06881G00010 | mes | PACid=17984742;RNAname=cassava4.1_032410m;GeneName=cassava4.1_032410m.g;transcript=ne;prot=eq | + | scaffold06881 | No | |
| MT6G086120 | mtr | Extensin-like protein (AHRD V1 *--- Q9LHF1_ARATH) | transcript=eq;prot=eq;pid=Medtr6g086120.1; | - | 6 | No |
| MT8G083560 | mtr | Receptor-like protein kinase 5 (AHRD V1 *--- P47735); contains Interpro domain(s) IPR013210 Leucine-rich repeat, N-terminal | transcript=eq;prot=eq;pid=Medtr8g083560.1; | + | 8 | No |