Sub-family  

Parent family
HOM001114
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO001118 has 42 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 42 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G32030 aly name=fgenesh2_kg.7__3015__AT5G34940.2;pid=493582;prot=eq;tid=493582 - scaffold_7 No
AT5G34940 ath The protein is predicted (WoLF PSORT program) to be membrane-associated.;glucuronidase 3 transcript=eq;prot=eq; - 5 No
BD1G47760 bdi Glycosyl hydrolase (GH), subfamily GH79 pid=Bradi1g47760.1;tid=Bradi1g47760.1;GeneName=Bradi1g47760;Name=BdGH79_2;transcript=eq;prot=eq + Bd1 No
BD3G54370 bdi Glycosyl hydrolase (GH), subfamily GH79 pid=Bradi3g54370.1;tid=Bradi3g54370.1;GeneName=Bradi3g54370;Name=BdGH79_4;transcript=eq;prot=eq + Bd3 No
CP00187G00050 cpa name=evm.TU.supercontig_187.5;pid=evm.TU.supercontig_187.5;prot=eq;transcript=eq - supercontig_187 No
CP00277G00040 cpa name=evm.TU.supercontig_277.4;pid=evm.TU.supercontig_277.4;prot=eq;transcript=eq + supercontig_277 No
FV1G04250 fve Heparanase-like protein 3, Precursor (putative) transcript=eq;prot=eq;pid=gene30784 + LG1 No
FV2G39620 fve Heparanase-like protein 3, Precursor (similar to) transcript=eq;prot=eq;pid=gene11598 + LG2 No
GM09G11990 gma 09 pid=16275493;transcript=eq;prot=eq;name=Glyma09g11990.1 + Gm09 No
GM13G23190 gma 13 pid=16291267;transcript=eq;prot=eq;name=Glyma13g23190.1 - Gm13 No
GM15G23550 gma 15 pid=16299699;transcript=eq;prot=eq;name=Glyma15g23550.1 - Gm15 No
GM17G11670 gma 17 pid=16305240;transcript=eq;prot=eq;name=Glyma17g11670.1 + Gm17 No
LJ6G009370 lja prot=eq;transcript=eq;scaffold=CM0037;name=chr6.CM0037.1420.nc + chr6 No
MD15G006590 mdo transcript=eq;prot=eq;pid=MDP0000199066;tid=MDP0000199066;contig=MDC013289.478 - 15 No
MD15G009370 mdo transcript=eq;prot=eq;pid=MDP0000088659;tid=MDP0000088659;contig=MDC016446.60 + 15 No
ME00232G00010 mes PACid=17990998;RNAname=cassava4.1_005011m;GeneName=cassava4.1_005011m.g;transcript=eq;prot=eq + scaffold00232 No
ME03049G00110 mes PACid=17959917;RNAname=cassava4.1_031502m;GeneName=cassava4.1_031502m.g;transcript=eq;prot=eq - scaffold03049 No
ME08686G00810 mes PACid=17972702;RNAname=cassava4.1_032464m;GeneName=cassava4.1_032464m.g;transcript=eq;prot=eq + scaffold08686 No
MT4G116070 mtr Heparanase-like protein 3 (AHRD V1 ***- Q9FZP1); contains Interpro domain(s) IPR005199 Glycoside hydrolase family 79, N-terminal transcript=eq;prot=eq;pid=Medtr4g116070.1; - 4 No
OS02G55870 osa heparanase%2Dlike protein precursor, putative, expressed transcript=eq;prot=eq; + 2 No
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