Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (10 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO001095 has 42 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 42 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G24030 aly name=fgenesh2_kg.4__1856__AT2G37900.1;pid=482796;prot=eq;tid=482796 - scaffold_4 No
AL5G24000 aly name=scaffold_502498.1;pid=906794;prot=eq;tid=938307 - scaffold_5 No
AT2G37900 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G53960.1); Has 7031 Blast hits to 6882 proteins in 1319 species: Archae - 0; Bacteria - 3384; Metazoa - 508; Fungi - 445; Plants - 2220; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 2 No
AT3G53960 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 3 No
BD1G03500 bdi pid=Bradi1g03500.1;tid=Bradi1g03500.1;GeneName=Bradi1g03500;transcript=eq;prot=eq + Bd1 No
CP00056G00450 cpa name=evm.TU.supercontig_56.45;pid=evm.TU.supercontig_56.45;prot=eq;transcript=eq - supercontig_56 No
FV6G12020 fve Peptide transporter PTR5 (probable) transcript=eq;prot=eq;pid=gene18721 + LG6 No
FV7G28400 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene20866 - LG7 No
GM01G25890 gma 01 pid=16244464;transcript=eq;prot=eq;name=Glyma01g25890.1 - Gm01 No
GM07G16740 gma 07 pid=16267516;transcript=eq;prot=eq;name=Glyma07g16740.1 - Gm07 No
GM11G34580 gma 11 pid=16285373;transcript=eq;prot=eq;name=Glyma11g34580.1 - Gm11 No
GM11G34600 gma 11 pid=16285375;transcript=eq;prot=eq;name=Glyma11g34600.1 - Gm11 No
GM11G34620 gma 11 pid=16285377;transcript=eq;prot=eq;name=Glyma11g34620.1 - Gm11 No
GM18G03770 gma 18 pid=16307833;transcript=eq;prot=eq;name=Glyma18g03770.1 + Gm18 No
GM18G03780 gma 18 pid=16307834;transcript=eq;prot=eq;name=Glyma18g03780.1 + Gm18 No
GM18G03790 gma 18 pid=16307835;transcript=eq;prot=eq;name=Glyma18g03790.1 + Gm18 No
GM18G03800 gma 18 pid=16307836;transcript=eq;prot=eq;name=Glyma18g03800.1 + Gm18 No
GM18G41270 gma 18 pid=16310120;transcript=eq;prot=eq;name=Glyma18g41270.1 + Gm18 No
MD01G012940 mdo transcript=eq;prot=eq;pid=MDP0000313230;tid=MDP0000313230;contig=MDC021251.197 - 1 No
MD03G010010 mdo transcript=eq;prot=eq;pid=MDP0000152854;tid=MDP0000152854;contig=MDC018526.32 - 3 No
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