Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (2 genes)



The gene family ORTHO000999 has 43 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 43 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G24140 aly name=fgenesh2_kg.1__2448__AT1G22540.1;pid=472494;prot=eq;tid=472494 + scaffold_1 No
AT1G22540 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 1 No
BD2G24327 bdi pid=Bradi2g24327.1;tid=Bradi2g24327.1;GeneName=Bradi2g24327;transcript=eq;prot=eq + Bd2 No
CP00177G00220 cpa name=evm.TU.supercontig_177.22;pid=evm.TU.supercontig_177.22;prot=eq;transcript=eq + supercontig_177 No
CP00177G00230 cpa name=evm.TU.supercontig_177.23;pid=evm.TU.supercontig_177.23;prot=eq;transcript=eq + supercontig_177 No
CP00177G00240 cpa name=evm.TU.supercontig_177.24;pid=evm.TU.supercontig_177.24;prot=eq;transcript=eq + supercontig_177 No
FV5G23570 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene26865 - LG5 No
FV5G23580 fve Peptide transporter PTR2 (probable) transcript=eq;prot=eq;pid=gene26866 - LG5 No
FV5G23620 fve Peptide transporter PTR5 (probable) transcript=eq;prot=eq;pid=gene26870 - LG5 No
FV5G23640 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene26872 - LG5 No
GM04G43550 gma 04 pid=16257779;transcript=eq;prot=eq;name=Glyma04g43550.1 + Gm04 No
GM12G00380 gma 12 pid=16285838;transcript=eq;prot=eq;name=Glyma12g00380.1 + Gm12 No
LJ0G076010 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_025662;name=LjSGA_025662.1 - LjSGA_025662 No
MD15G033170 mdo transcript=eq;prot=eq;pid=MDP0000282789;tid=MDP0000282789;contig=MDC006159.556 + 15 No
ME09565G00060 mes PACid=17960337;RNAname=cassava4.1_004502m;GeneName=cassava4.1_004502m.g;transcript=eq;prot=eq - scaffold09565 No
ME09565G00070 mes PACid=17960368;RNAname=cassava4.1_004492m;GeneName=cassava4.1_004492m.g;transcript=eq;prot=eq - scaffold09565 No
ME09565G00110 mes PACid=17960333;RNAname=cassava4.1_023252m;GeneName=cassava4.1_023252m.g;transcript=eq;prot=eq + scaffold09565 No
MT3G005010 mtr Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region transcript=eq;prot=eq;pid=Medtr3g005010.1; - 3 No
OS01G65110 osa POT family protein, expressed transcript=eq;prot=eq; + 1 No
OS05G35650 osa peptide transporter PTR2, putative, expressed transcript=eq;prot=eq; - 5 No
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