Sub-family  

Parent family
HOM001382
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO000950 has 44 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 44 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G15100 aly name=scaffold_401535.1;pid=902034;prot=eq;tid=933547 - scaffold_4 No
AL7G09510 aly name=scaffold_700997.1;pid=913255;prot=eq;tid=944768 - scaffold_7 No
AT2G30470 ath HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50┬ÁM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.;high-level expression of sugar-inducible gene 2 transcript=eq;prot=eq; - 2 No
AT4G32010 ath HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).;HSI2-like 1 transcript=eq;prot=eq; + 4 No
BD1G17680 bdi ABI3VP1 transcription factor pid=Bradi1g17680.1;tid=Bradi1g17680.1;GeneName=Bradi1g17680;Name=BdABI7;transcript=eq;prot=eq + Bd1 No
CP00000G00830 cpa name=evm.TU.supercontig_0.83;pid=evm.TU.supercontig_0.83;prot=eq;transcript=eq - supercontig_0 No
CP00002G02790 cpa name=evm.TU.supercontig_2.279;pid=evm.TU.supercontig_2.279;prot=eq;transcript=eq + supercontig_2 No
CR13G00120 cre name=fgenesh1_pg.C_scaffold_2000015;pid=8922;prot=eq;tid=8922;transcript=eq - chromosome_13 No
FV3G31260 fve B3 domain-containing protein Os07g0679700 (probable) transcript=eq;prot=eq;pid=gene28098 + LG3 No
FV6G08680 fve B3 domain-containing protein Os07g0679700 (probable) transcript=eq;prot=eq;pid=gene13877 + LG6 No
GM01G32810 gma 01 pid=16244986;transcript=eq;prot=eq;name=Glyma01g32810.1 - Gm01 No
GM03G04330 gma 03 pid=16251084;transcript=eq;prot=eq;name=Glyma03g04330.1 + Gm03 No
GM11G31270 gma 11 pid=16285031;transcript=eq;prot=eq;name=Glyma11g31270.1 - Gm11 No
GM18G05840 gma 18 pid=16308040;transcript=eq;prot=eq;name=Glyma18g05840.1 + Gm18 No
LJ0G014130 lja prot=eq;transcript=eq;scaffold=LjSGA_009543;name=LjSGA_009543.1 + LjSGA_009543 No
LJ0G031680 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_014559;name=LjSGA_014559.1 - LjSGA_014559 No
LJ0G091360 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_029833;name=LjSGA_029833.1 + LjSGA_029833 No
MD00G051000 mdo transcript=eq;prot=eq;pid=MDP0000267885;tid=MDP0000267885;contig=MDC002120.420 - MDC002120.420 No
MD00G311840 mdo transcript=eq;prot=eq;pid=MDP0000127640;tid=MDP0000127640;contig=MDC013231.396 - MDC013231.396 No
MD03G003880 mdo transcript=eq;prot=eq;pid=MDP0000229368;tid=MDP0000229368;contig=MDC031041.3 + 3 No
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