Sub-family  

Parent family
HOM000062
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (6 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (7 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (5 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO000937 has 44 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 44 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G02850 aly name=fgenesh1_pm.C_scaffold_3000246;pid=317230;prot=eq;tid=317230 - scaffold_3 No
AL6G17430 aly name=fgenesh2_kg.6__1756__AT5G17540.1;pid=488622;prot=eq;tid=488622 - scaffold_6 No
AT3G03480 ath acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (CHAT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G17540.1); Has 2522 Blast hits to 2511 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 44; Plants - 2476; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase transcript=eq;prot=eq; - 3 No
AT5G17540 ath HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein transcript=eq;prot=eq; - 5 No
BD3G30220 bdi pid=Bradi3g30220.1;tid=Bradi3g30220.1;GeneName=Bradi3g30220;transcript=eq;prot=eq + Bd3 No
CP34860G00010 cpa name=evm.TU.contig_34860.1;pid=evm.TU.contig_34860.1;prot=eq;transcript=eq - contig_34860 No
FV2G20290 fve 10-deacetylbaccatin III 10-O-acetyltransferase (DBAT) (probable) transcript=eq;prot=eq;pid=gene27512 - LG2 No
GM02G00340 gma 02 pid=16246483;transcript=eq;prot=eq;name=Glyma02g00340.1 - Gm02 No
GM03G40430 gma 03 pid=16254015;transcript=eq;prot=eq;name=Glyma03g40430.1 - Gm03 No
GM03G40450 gma 03 pid=16254020;transcript=eq;prot=eq;name=Glyma03g40450.1 + Gm03 No
GM10G00220 gma 10 pid=16278078;transcript=eq;prot=eq;name=Glyma10g00220.1 - Gm10 No
GM19G43090 gma 19 pid=16314757;transcript=eq;prot=eq;name=Glyma19g43090.1 - Gm19 No
GM19G43110 gma 19 pid=16314759;transcript=eq;prot=eq;name=Glyma19g43110.1 - Gm19 No
LJ0G008610 lja prot=eq;transcript=eq;scaffold=LjSGA_007374;name=LjSGA_007374.1 - LjSGA_007374 No
LJ0G108930 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_034642;name=LjSGA_034642.1 - LjSGA_034642 No
LJ0G188980 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_060130;name=LjSGA_060130.1 - LjSGA_060130 No
LJ3G019520 lja prot=eq;transcript=eq;scaffold=CM0129;name=chr3.CM0129.240.nd - chr3 No
MD00G239290 mdo transcript=eq;prot=eq;pid=MDP0000185169;tid=MDP0000185169;contig=MDC010374.643 - MDC010374.643 No
ME03614G01370 mes PACid=17965986;RNAname=cassava4.1_007757m;GeneName=cassava4.1_007757m.g;transcript=eq;prot=eq + scaffold03614 No
ME03614G01380 mes PACid=17965558;RNAname=cassava4.1_007272m;GeneName=cassava4.1_007272m.g;transcript=eq;prot=eq + scaffold03614 No
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