Sub-family  

Parent family
HOM000042
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO000915 has 44 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 44 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G15760 aly name=fgenesh2_kg.1__1634__AT1G14920.1;pid=471680;prot=eq;tid=471680 + scaffold_1 No
AL2G13340 aly name=fgenesh2_kg.2__868__AT1G66350.1;pid=475738;prot=eq;tid=475738 + scaffold_2 No
AL3G02810 aly name=fgenesh2_kg.3__292__AT3G03450.1;pid=477591;prot=eq;tid=477591 - scaffold_3 No
AL5G00570 aly name=fgenesh2_kg.5__65__AT2G01570.1;pid=484073;prot=eq;tid=484073 - scaffold_5 No
AL6G17380 aly name=fgenesh2_kg.6__1749__AT5G17490.1;pid=488615;prot=eq;tid=488615 - scaffold_6 No
AT1G14920 ath Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.;GRAS family transcription factor family protein transcript=eq;prot=eq; + 1 No
AT1G66350 ath Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.;RGA-like 1 transcript=eq;prot=eq; + 1 No
AT2G01570 ath Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.;GRAS family transcription factor family protein transcript=eq;prot=eq; - 2 No
AT3G03450 ath Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.;RGA-like 2 transcript=eq;prot=eq; - 3 No
AT5G17490 ath DELLA subfamily member involved in GA signal transduction;RGA-like protein 3 transcript=eq;prot=eq; - 5 No
BD1G11090 bdi homolog of DELLA a gene involved in GA signalling pid=Bradi1g11090.1;tid=Bradi1g11090.1;GeneName=Bradi1g11090;Name=BdGRAS4;transcript=eq;prot=eq + Bd1 No
CP00002G02260 cpa name=evm.TU.supercontig_2.226;pid=evm.TU.supercontig_2.226;prot=eq;transcript=eq + supercontig_2 No
CP00116G00430 cpa name=evm.TU.supercontig_116.43;pid=evm.TU.supercontig_116.43;prot=eq;transcript=eq - supercontig_116 No
FV0G08430 fve DELLA protein GAIP-B (GAIP-B) (putative) transcript=eq;prot=eq;pid=gene06210 + scf0513158 No
GM05G27190 gma 05 pid=16259791;transcript=eq;prot=eq;name=Glyma05g27190.1 + Gm05 No
GM08G10140 gma 08 pid=16270621;transcript=eq;prot=eq;name=Glyma08g10140.1 + Gm08 No
GM11G33720 gma 11 pid=16285270;transcript=eq;prot=eq;name=Glyma11g33720.1 + Gm11 No
GM18G04500 gma 18 pid=16307907;transcript=eq;prot=eq;name=Glyma18g04500.1 - Gm18 No
LJ0G459330 lja prot=eq;transcript=eq;scaffold=LjT40K11;name=LjT40K11.90.nc - chr0 No
LJ0G459600 lja prot=eq;transcript=eq;scaffold=LjT15P09;name=LjT15P09.140.nc - chr0 No
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