Sub-family  

Parent family
HOM000094
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family ORTHO000913 has 44 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 44 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G10350 aly name=scaffold_101106.1;pid=888312;prot=eq;tid=919825 - scaffold_1 No
AL2G06320 aly name=fgenesh2_kg.2__457__AT1G59830.1;pid=475327;prot=eq;tid=475327 + scaffold_2 No
AL2G18250 aly name=fgenesh2_kg.2__1252__AT1G69960.1;pid=476122;prot=eq;tid=476122 - scaffold_2 No
AT1G10430 ath Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].;protein phosphatase 2A-2 transcript=eq;prot=eq; - 1 No
AT1G59830 ath Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].;protein phosphatase 2A-2 transcript=eq;prot=eq; - 1 No
AT1G69960 ath type 2A serine/threonine protein phosphatase (PP2A) mRNA,;serine/threonine protein phosphatase 2A transcript=eq;prot=eq; - 1 No
BD1G37360 bdi NF-kappaB-inducing kinase activity, myosin phosphatase activity (Blast2GO) pid=Bradi1g37360.1;tid=Bradi1g37360.1;GeneName=Bradi1g37360;transcript=eq;prot=eq - Bd1 No
BD3G08090 bdi NF-kappaB-inducing kinase activity, myosin phosphatase activity (Blast2GO) pid=Bradi3g08090.1;tid=Bradi3g08090.1;GeneName=Bradi3g08090;transcript=eq;prot=eq - Bd3 No
CR19G00100 cre name=estExt_fgenesh2_pg.C_470013;pid=193562;prot=eq;tid=193562;transcript=eq - scaffold_19 No
FV4G22760 fve Serine/threonine-protein phosphatase PP2A catalytic subunit transcript=eq;prot=eq;pid=gene00744 - LG4 No
GM01G04570 gma 01 pid=16243403;transcript=eq;prot=eq;name=Glyma01g04570.1 - Gm01 No
GM02G02990 gma 02 pid=16246794;transcript=eq;prot=eq;name=Glyma02g02990.1 + Gm02 No
GM08G40490 gma 08 pid=16273367;transcript=eq;prot=eq;name=Glyma08g40490.1 - Gm08 No
GM18G17100 gma 18 pid=16309014;transcript=eq;prot=eq;name=Glyma18g17100.1 + Gm18 No
LJ2G017250 lja prot=eq;transcript=eq;scaffold=CM0028;name=chr2.CM0028.270.nd - chr2 No
MD00G029840 mdo transcript=eq;prot=eq;pid=MDP0000326332;tid=MDP0000326332;contig=MDC001279.244 + MDC001279.244 No
MD06G014960 mdo transcript=eq;prot=eq;pid=MDP0000230606;tid=MDP0000230606;contig=MDC019748.161 - 6 No
MD13G005710 mdo transcript=eq;prot=eq;pid=MDP0000172862;tid=MDP0000172862;contig=MDC003117.149 + 13 No
MD16G004580 mdo transcript=eq;prot=eq;pid=MDP0000234078;tid=MDP0000234078;contig=MDC023187.86 + 16 No
ME04209G00280 mes PACid=17993662;RNAname=cassava4.1_012521m;GeneName=cassava4.1_012521m.g;transcript=eq;prot=eq + scaffold04209 No
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