Sub-family  

Parent family
HOM000151
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (4 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO000823 has 46 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 46 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G10900 aly name=scaffold_101161.1;pid=888367;prot=eq;tid=919880 - scaffold_1 No
AL1G25180 aly name=fgenesh2_kg.1__2547__AT1G23340.1;pid=472593;prot=eq;tid=472593 - scaffold_1 No
AL2G19090 aly name=Al_scaffold_0002_1729;pid=877135;prot=eq;tid=908648 + scaffold_2 No
AL8G14080 aly name=scaffold_801420.1;pid=918020;prot=eq;tid=949533 - scaffold_8 No
AT1G10750 ath Protein of Unknown Function (DUF239); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 789 Blast hits to 744 proteins in 31 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 764; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; - 1 No
AT1G23340 ath Protein of Unknown Function (DUF239); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G70550.1); Has 778 Blast hits to 728 proteins in 29 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 10; Plants - 755; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; - 1 No
AT1G70550 ath Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 775 Blast hits to 727 proteins in 29 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 10; Plants - 752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; + 1 No
AT5G50150 ath Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; - 5 No
BD2G40687 bdi pid=Bradi2g40687.1;tid=Bradi2g40687.1;GeneName=Bradi2g40687;transcript=eq;prot=eq - Bd2 No
CP00069G00920 cpa name=evm.TU.supercontig_69.92;pid=evm.TU.supercontig_69.92;prot=eq;transcript=eq + supercontig_69 No
CP00153G00120 cpa name=evm.TU.supercontig_153.12;pid=evm.TU.supercontig_153.12;prot=eq;transcript=eq + supercontig_153 No
FV0G00070 fve LIM and UIM domain-containing At1g19270 (probable) transcript=eq;prot=eq;pid=gene03583 + scf0513158 No
FV5G06660 fve Isocitrate dehydrogenase [NADP] (IDH) (probable) transcript=eq;prot=eq;pid=gene31778 + LG5 No
GM01G03390 gma 01 pid=16243265;transcript=eq;prot=eq;name=Glyma01g03390.1 - Gm01 No
GM02G04240 gma 02 pid=16246933;transcript=eq;prot=eq;name=Glyma02g04240.1 + Gm02 No
GM05G02460 gma 05 pid=16258068;transcript=eq;prot=eq;name=Glyma05g02460.1 + Gm05 No
GM06G19020 gma 06 pid=16263469;transcript=eq;prot=eq;name=Glyma06g19020.1 - Gm06 No
GM17G09450 gma 17 pid=16304979;transcript=eq;prot=eq;name=Glyma17g09450.1 - Gm17 No
GM18G20700 gma 18 pid=16309193;transcript=eq;prot=eq;name=Glyma18g20700.1 + Gm18 No
LJ2G018600 lja prot=eq;transcript=eq;scaffold=CM0008;name=chr2.CM0008.510.nc + chr2 No
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