Sub-family 
- Id
- ORTHO000798
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM001799
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (2 genes)
- cpa
- Carica papaya (2 genes)
- fve
- Fragaria vesca (2 genes)
- gma
- Glycine max (3 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (4 genes)
- mes
- Manihot esculenta (3 genes)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (2 genes)
- osa
- Oryza sativa ssp. japonica (2 genes)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ppa
- Physcomitrella patens (2 genes)
- ptr
- Populus trichocarpa (4 genes)
- rco
- Ricinus communis (3 genes)
- sbi
- Sorghum bicolor (2 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (2 genes)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (4 genes)
The gene family ORTHO000798 has 47 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO000798
Page 1 of 3, showing 20 records out of 47 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL5G18480 | aly | name=scaffold_501919.1;pid=906215;prot=eq;tid=937728 | - | scaffold_5 | No | |
| AL7G35670 | aly | name=fgenesh1_pg.C_scaffold_7002952;pid=355779;prot=eq;tid=355779 | - | scaffold_7 | No | |
| AT3G49350 | ath | Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink).;Ypt/Rab-GAP domain of gyp1p superfamily protein | transcript=eq;prot=eq; | - | 3 | No |
| AT5G41940 | ath | Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G53570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Ypt/Rab-GAP domain of gyp1p superfamily protein | transcript=eq;prot=eq; | + | 5 | No |
| BD3G42170 | bdi | Rab GTPase binding (Blast2GO) | pid=Bradi3g42170.1;tid=Bradi3g42170.1;GeneName=Bradi3g42170;transcript=eq;prot=eq | + | Bd3 | No |
| BD4G35880 | bdi | Rab GTPase binding (Blast2GO) | pid=Bradi4g35880.2;tid=Bradi4g35880.2;GeneName=Bradi4g35880;transcript=eq;prot=eq | + | Bd4 | No |
| CP00003G01350 | cpa | name=evm.TU.supercontig_3.135;pid=evm.TU.supercontig_3.135;prot=eq;transcript=eq | - | supercontig_3 | No | |
| CP00003G01360 | cpa | name=evm.TU.supercontig_3.136;pid=evm.TU.supercontig_3.136;prot=eq;transcript=eq | - | supercontig_3 | No | |
| FV0G41950 | fve | GTPase-activating protein GYP7 (probable) | transcript=eq;prot=eq;pid=gene01900 | + | scf0512956 | No |
| FV7G35310 | fve | GTPase-activating protein GYP7 (probable) | transcript=eq;prot=eq;pid=gene12769 | + | LG7 | No |
| GM04G41000 | gma | 04 | pid=16257463;transcript=eq;prot=eq;name=Glyma04g41000.1 | + | Gm04 | No |
| GM06G13850 | gma | 06 | pid=16262861;transcript=eq;prot=eq;name=Glyma06g13850.1 | - | Gm06 | No |
| GM14G25810 | gma | 14 | pid=16296054;transcript=eq;prot=eq;name=Glyma14g25810.1 | - | Gm14 | No |
| LJ0G138510 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_043351;name=LjSGA_043351.1 | + | LjSGA_043351 | No | |
| MD00G057770 | mdo | transcript=eq;prot=eq;pid=MDP0000933660;tid=MDP0000933660;contig=MDC002407.854 | - | MDC002407.854 | No | |
| MD01G022390 | mdo | transcript=eq;prot=eq;pid=MDP0000309310;tid=MDP0000309310;contig=MDC022149.74 | - | 1 | No | |
| MD07G020470 | mdo | transcript=eq;prot=eq;pid=MDP0000296871;tid=MDP0000296871;contig=MDC013149.567 | - | 7 | No | |
| MD13G011330 | mdo | transcript=eq;prot=eq;pid=MDP0000138059;tid=MDP0000138059;contig=MDC012033.262 | + | 13 | No | |
| ME02895G00030 | mes | PACid=17988246;RNAname=cassava4.1_004999m;GeneName=cassava4.1_004999m.g;transcript=eq;prot=eq | + | scaffold02895 | No | |
| ME07330G00060 | mes | PACid=17990033;RNAname=cassava4.1_006305m;GeneName=cassava4.1_006305m.g;transcript=eq;prot=eq | + | scaffold07330 | No |