Sub-family  

Parent family
HOM000541
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (3 genes)
gma
Glycine max (5 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO000795 has 47 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 47 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G29850 aly name=scaffold_403120.1;pid=903619;prot=eq;tid=935132 - scaffold_4 No
AT2G42490 ath Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).;Copper amine oxidase family protein transcript=eq;prot=eq; - 2 No
BD3G47537 bdi pid=Bradi3g47537.1;tid=Bradi3g47537.1;GeneName=Bradi3g47537;transcript=eq;prot=eq - Bd3 No
BD5G13350 bdi copper ion binding, amine oxidase activity (Blast2GO) pid=Bradi5g13350.2;tid=Bradi5g13350.2;GeneName=Bradi5g13350;transcript=eq;prot=eq - Bd5 No
CP00033G00100 cpa name=evm.TU.supercontig_33.10;pid=evm.TU.supercontig_33.10;prot=eq;transcript=eq - supercontig_33 No
CR02G14360 cre name=fgenesh2_pg.C_scaffold_35000049;pid=176519;prot=eq;tid=176519;transcript=eq + chromosome_2 No
FV0G10900 fve Primary amine oxidase, Precursor (probable) transcript=eq;prot=eq;pid=gene07003 + scf0513160 No
FV2G07260 fve Primary amine oxidase, Precursor (probable) transcript=eq;prot=eq;pid=gene07643 - LG2 No
FV5G08250 fve Primary amine oxidase, Precursor (probable) transcript=eq;prot=eq;pid=gene09848 - LG5 No
GM02G04360 gma 02 pid=16246949;transcript=eq;prot=eq;name=Glyma02g04360.1 - Gm02 No
GM06G18810 gma 06 pid=16263448;transcript=eq;prot=eq;name=Glyma06g18810.1 + Gm06 No
GM08G38990 gma 08 pid=16273199;transcript=eq;prot=eq;name=Glyma08g38990.1 + Gm08 No
GM17G09290 gma 17 pid=16304963;transcript=eq;prot=eq;name=Glyma17g09290.1 + Gm17 No
GM18G20800 gma 18 pid=16309201;transcript=eq;prot=eq;name=Glyma18g20800.1 - Gm18 No
LJ0G082000 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_027245;name=LjSGA_027245.1 - LjSGA_027245 No
MD00G083060 mdo transcript=eq;prot=eq;pid=MDP0000617984;tid=MDP0000617984;contig=MDC003520.222 - MDC003520.222 No
MD00G128580 mdo transcript=eq;prot=eq;pid=MDP0000320213;tid=MDP0000320213;contig=MDC005473.454 - MDC005473.454 No
MD09G014680 mdo transcript=eq;prot=eq;pid=MDP0000159111;tid=MDP0000159111;contig=MDC000737.216 + 9 No
MD13G007640 mdo transcript=eq;prot=eq;pid=MDP0000863012;tid=MDP0000863012;contig=MDC021122.71 + 13 No
ME04175G00160 mes PACid=17963342;RNAname=cassava4.1_002036m;GeneName=cassava4.1_002036m.g;transcript=eq;prot=eq - scaffold04175 No
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