Sub-family  

Parent family
HOM000151
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (3 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family ORTHO000737 has 48 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 48 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G49960 aly name=fgenesh2_kg.1__4551__AT1G55360.1;pid=474597;prot=eq;tid=474597 - scaffold_1 No
AL3G14050 aly name=scaffold_301553.1;pid=897583;prot=eq;tid=929096 + scaffold_3 No
AL8G22100 aly name=fgenesh2_kg.8__1559__AT5G56530.1;pid=495743;prot=eq;tid=495743 + scaffold_8 No
AT1G55360 ath Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; - 1 No
AT3G13510 ath Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1); Has 759 Blast hits to 705 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 734; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; + 3 No
AT5G56530 ath Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; + 5 No
BD1G04720 bdi pid=Bradi1g04720.1;tid=Bradi1g04720.1;GeneName=Bradi1g04720;transcript=eq;prot=eq - Bd1 No
BD1G23920 bdi pid=Bradi1g23920.1;tid=Bradi1g23920.1;GeneName=Bradi1g23920;transcript=eq;prot=eq - Bd1 No
BD1G54360 bdi pid=Bradi1g54360.1;tid=Bradi1g54360.1;GeneName=Bradi1g54360;transcript=eq;prot=eq - Bd1 No
CP00228G00240 cpa name=evm.TU.supercontig_228.24;pid=evm.TU.supercontig_228.24;prot=eq;transcript=eq - supercontig_228 No
FV3G36030 fve Outer capsid glycoprotein VP7, Precursor (probable) transcript=eq;prot=eq;pid=gene01601 + LG3 No
GM05G30070 gma 05 pid=16260127;transcript=eq;prot=eq;name=Glyma05g30070.1 + Gm05 No
GM08G13210 gma 08 pid=16270978;transcript=eq;prot=eq;name=Glyma08g13210.1 + Gm08 No
GM08G17180 gma 08 pid=16271452;transcript=eq;prot=eq;name=Glyma08g17180.1 + Gm08 No
GM15G42010 gma 15 pid=16300788;transcript=eq;prot=eq;name=Glyma15g42010.1 - Gm15 No
LJ0G441040 lja partial;prot=eq;transcript=eq;scaffold=LjT19N22;name=LjT19N22.30.nd - chr0 No
MD00G011190 mdo transcript=eq;prot=eq;pid=MDP0000470756;tid=MDP0000470756;contig=MDC000457.388 - MDC000457.388 No
MD03G000770 mdo transcript=eq;prot=eq;pid=MDP0000143636;tid=MDP0000143636;contig=MDC020774.75 + 3 No
MD11G000250 mdo transcript=eq;prot=eq;pid=MDP0000157380;tid=MDP0000157380;contig=MDC000457.508 + 11 No
ME01508G00030 mes PACid=17969755;RNAname=cassava4.1_008592m;GeneName=cassava4.1_008592m.g;transcript=eq;prot=eq + scaffold01508 No
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