Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (6 genes)
mtr
Medicago truncatula (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (8 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO000697 has 49 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 49 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G19840 aly name=fgenesh2_kg.1__2066__AT1G18880.1;pid=472112;prot=eq;tid=472112 + scaffold_1 No
AL5G16750 aly name=fgenesh1_pm.C_scaffold_5000944;pid=323400;prot=eq;tid=323400 - scaffold_5 No
AL8G29160 aly name=fgenesh2_kg.8__2266__AT5G62680.1;pid=496450;prot=eq;tid=496450 - scaffold_8 No
AT1G18880 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G62680.1); Has 4002 Blast hits to 3797 proteins in 617 species: Archae - 0; Bacteria - 698; Metazoa - 561; Fungi - 400; Plants - 2175; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 1 No
AT3G47960 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G62680.1); Has 3941 Blast hits to 3750 proteins in 534 species: Archae - 0; Bacteria - 697; Metazoa - 584; Fungi - 378; Plants - 2186; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 3 No
AT5G62680 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 5 No
BD1G12190 bdi pid=Bradi1g12190.1;tid=Bradi1g12190.1;GeneName=Bradi1g12190;transcript=eq;prot=eq + Bd1 No
CP00017G01690 cpa name=evm.TU.supercontig_17.169;pid=evm.TU.supercontig_17.169;prot=eq;transcript=eq + supercontig_17 No
CP00017G01700 cpa name=evm.TU.supercontig_17.170;pid=evm.TU.supercontig_17.170;prot=eq;transcript=eq + supercontig_17 No
CP00017G01710 cpa name=evm.TU.supercontig_17.171;pid=evm.TU.supercontig_17.171;prot=eq;transcript=eq + supercontig_17 No
FV5G18600 fve Peptide transporter PTR2 (probable) transcript=eq;prot=eq;pid=gene09571 - LG5 No
GM05G01440 gma 05 pid=16257955;transcript=eq;prot=eq;name=Glyma05g01440.1 + Gm05 No
GM05G01450 gma 05 pid=16257956;transcript=eq;prot=eq;name=Glyma05g01450.1 + Gm05 No
GM17G10430 gma 17 pid=16305088;transcript=eq;prot=eq;name=Glyma17g10430.1 - Gm17 No
GM17G10440 gma 17 pid=16305089;transcript=eq;prot=eq;name=Glyma17g10440.1 - Gm17 No
LJ4G018320 lja prot=eq;transcript=eq;scaffold=CM0170;name=chr4.CM0170.40.nd - chr4 No
LJ4G018470 lja prot=eq;transcript=eq;scaffold=CM0170;name=chr4.CM0170.190.nd - chr4 No
MD00G018070 mdo transcript=eq;prot=eq;pid=MDP0000165187;tid=MDP0000165187;contig=MDC000756.383 - MDC000756.383 No
MD00G322360 mdo transcript=eq;prot=eq;pid=MDP0000296517;tid=MDP0000296517;contig=MDC013667.360 + MDC013667.360 No
MD00G359070 mdo transcript=eq;prot=eq;pid=MDP0000307910;tid=MDP0000307910;contig=MDC016080.152 - MDC016080.152 No
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