Sub-family  

Parent family
HOM000094
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (6 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (4 genes)



The gene family ORTHO000650 has 51 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 51 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G29860 aly name=scaffold_403121.1;pid=903620;prot=eq;tid=935133 - scaffold_4 No
AL5G29090 aly name=fgenesh2_kg.5__2291__AT3G58500.1;pid=486299;prot=eq;tid=486299 - scaffold_5 No
AT2G42500 ath Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].;protein phosphatase 2A-3 transcript=eq;prot=eq; - 2 No
AT3G58500 ath Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].;protein phosphatase 2A-4 transcript=eq;prot=eq; - 3 No
BD1G04850 bdi NF-kappaB-inducing kinase activity, myosin phosphatase activity (Blast2GO) pid=Bradi1g04850.1;tid=Bradi1g04850.1;GeneName=Bradi1g04850;transcript=eq;prot=eq - Bd1 No
BD1G73870 bdi NF-kappaB-inducing kinase activity, myosin phosphatase activity (Blast2GO) pid=Bradi1g73870.1;tid=Bradi1g73870.1;GeneName=Bradi1g73870;transcript=eq;prot=eq + Bd1 No
BD4G34000 bdi NF-kappaB-inducing kinase activity, myosin phosphatase activity (Blast2GO) pid=Bradi4g34000.1;tid=Bradi4g34000.1;GeneName=Bradi4g34000;transcript=eq;prot=eq + Bd4 No
CP00085G00310 cpa name=evm.TU.supercontig_85.31;pid=evm.TU.supercontig_85.31;prot=eq;transcript=eq - supercontig_85 No
CP00119G00730 cpa name=evm.TU.supercontig_119.73;pid=evm.TU.supercontig_119.73;prot=eq;transcript=eq - supercontig_119 No
CR02G11480 cre name=fgenesh1_pm.C_scaffold_331000001;pid=807;prot=eq;tid=807;transcript=eq + chromosome_2 No
FV6G27580 fve Serine/threonine-protein phosphatase PP2A-3 catalytic subunit transcript=eq;prot=eq;pid=gene18067 + LG6 No
GM02G26650 gma 02 pid=16248621;transcript=eq;prot=eq;name=Glyma02g26650.1 + Gm02 No
GM03G36510 gma 03 pid=16253549;transcript=eq;prot=eq;name=Glyma03g36510.1 + Gm03 No
GM05G28790 gma 05 pid=16259977;transcript=eq;prot=eq;name=Glyma05g28790.1 + Gm05 No
GM08G11940 gma 08 pid=16270826;transcript=eq;prot=eq;name=Glyma08g11940.1 + Gm08 No
GM09G15900 gma 09 pid=16275723;transcript=eq;prot=eq;name=Glyma09g15900.1 - Gm09 No
GM19G39170 gma 19 pid=16314282;transcript=eq;prot=eq;name=Glyma19g39170.1 + Gm19 No
LJ1G052030 lja prot=eq;transcript=eq;scaffold=CM0029;name=chr1.CM0029.200.nc - chr1 No
MD05G000080 mdo transcript=eq;prot=eq;pid=MDP0000221328;tid=MDP0000221328;contig=MDC022395.221 - 5 No
MD12G004760 mdo transcript=eq;prot=eq;pid=MDP0000309518;tid=MDP0000309518;contig=MDC020603.173 - 12 No
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