Sub-family 
- Id
- ORTHO000561
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000770
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (2 genes)
- cpa
- Carica papaya (2 genes)
- cre
- Chlamydomonas reinhardtii (2 genes)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (3 genes)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (2 genes)
- mrcc299
- Micromonas sp. RCC299 (2 genes)
- mtr
- Medicago truncatula (4 genes)
- olu
- Ostreococcus lucimarinus (1 gene)
- osa
- Oryza sativa ssp. japonica (8 genes)
- osaindica
- Oryza sativa ssp. indica (3 genes)
- ota
- Ostreococcus tauri (2 genes)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (2 genes)
- sbi
- Sorghum bicolor (2 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (2 genes)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (6 genes)
The gene family ORTHO000561 has 54 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO000561
Page 1 of 3, showing 20 records out of 54 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL2G09870 | aly | name=Al_scaffold_0002_934;pid=876340;prot=eq;tid=907853 | + | scaffold_2 | No | |
| ATCG00830 | ath | encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex;ribosomal protein L2 | transcript=eq;prot=eq; | - | chloroplast | No |
| ATCG01310 | ath | encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex;ribosomal protein L2 | transcript=eq;prot=eq; | + | chloroplast | No |
| BDCG00820 | bdi | rpl2;ribosomal protein L2;protein_id=ACF08679.1; | transl_table=11; | - | chloroplast | No |
| BDCG01240 | bdi | rpl2;ribosomal protein L2;protein_id=ACF08698.1; | transl_table=11; | + | chloroplast | No |
| CPCG00840 | cpa | rpl2;ribosomal protein L2;protein_id=ABY86824.1; | transl_table=11; | - | chloroplast | No |
| CPCG01280 | cpa | rpl2;ribosomal protein L2;protein_id=ABY86845.1; | transl_table=11; | + | chloroplast | No |
| CR07G07560 | cre | name=e_gwW.16.163.1;pid=116036;prot=eq;tid=116036;transcript=eq | - | chromosome_7 | No | |
| CRCG00210 | cre | rpl2;ribosomal protein L2;protein_id=DAA00915.1; | transl_table=11; | + | chloroplast | No |
| FV0G59230 | fve | 50S ribosomal protein L2, chloroplastic (similar to) | transcript=eq;prot=eq;pid=gene32734 | + | scf0510653 | No |
| GMCG00820 | gma | rpl2;ribosomal protein L2;protein_id=ABC25163.1; | transl_table=11; | - | chloroplast | No |
| GMCG01270 | gma | rpl2;ribosomal protein L2;protein_id=ABC25187.1; | transl_table=11; | + | chloroplast | No |
| LJ0G079200 | lja | prot=eq;transcript=eq;scaffold=LjSGA_026513;name=LjSGA_026513.1.3 | + | LjSGA_026513 | No | |
| LJCG00820 | lja | rpl2;ribosomal protein L2;protein_id=BAB33236.1; | transl_table=11; | - | chloroplast | No |
| LJCG01270 | lja | rpl2;ribosomal protein L2;protein_id=BAB33258.1; | transl_table=11; | + | chloroplast | No |
| MD00G208130 | mdo | transcript=eq;prot=eq;pid=MDP0000436957;tid=MDP0000436957;contig=MDC008988.418 | + | MDC008988.418 | No | |
| MECG00880 | mes | rpl2;ribosomal protein L2;protein_id=ABV66195.1; | transl_table=11; | - | chloroplast | No |
| MECG01340 | mes | rpl2;ribosomal protein L2;protein_id=ABV66216.1; | transl_table=11; | + | chloroplast | No |
| MRCC299_16G02170 | mrcc299 | name=fgenesh2_pm.C_Chr_16000039;pid=98429;prot=eq;tid=98429;transcript=eq | - | Chr_16 | No | |
| MRCC299_CG00490 | mrcc299 | large subunit ribosomal protein 2;protein_id=ACO55558.1; | transl_table=11; | - | chloroplast | No |