Sub-family  

Parent family
HOM000004
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (5 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (4 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (6 genes)



The gene family ORTHO000485 has 57 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 57 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G12870 aly name=scaffold_601325.1;pid=909268;prot=eq;tid=940781 + scaffold_6 No
AL6G18680 aly name=scaffold_601931.1;pid=909874;prot=eq;tid=941387 + scaffold_6 No
AT5G13160 ath Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.;Protein kinase superfamily protein transcript=eq;prot=eq; + 5 No
AT5G18610 ath Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G13160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Protein kinase superfamily protein transcript=eq;prot=eq; + 5 No
BD2G27350 bdi protein kinase family protein, putative, expressed, subfamily RLCK-VIIa pid=Bradi2g27350.1;tid=Bradi2g27350.1;GeneName=Bradi2g27350;transcript=eq;prot=eq - Bd2 No
BD2G60120 bdi protein kinase family protein, putative, expressed, subfamily RLCK-VIIa pid=Bradi2g60120.1;tid=Bradi2g60120.1;GeneName=Bradi2g60120;transcript=eq;prot=eq + Bd2 No
BD3G44250 bdi protein kinase family protein, putative, expressed, subfamily RLCK-VIIa pid=Bradi3g44250.1;tid=Bradi3g44250.1;GeneName=Bradi3g44250;transcript=eq;prot=eq + Bd3 No
BD5G08730 bdi protein kinase family protein, putative, expressed, subfamily RLCK-VIIa pid=Bradi5g08730.1;tid=Bradi5g08730.1;GeneName=Bradi5g08730;transcript=eq;prot=eq - Bd5 No
CP00016G01320 cpa name=evm.TU.supercontig_16.132;pid=evm.TU.supercontig_16.132;prot=eq;transcript=eq - supercontig_16 No
CP00099G00570 cpa name=evm.TU.supercontig_99.57;pid=evm.TU.supercontig_99.57;prot=eq;transcript=eq + supercontig_99 No
FV0G13500 fve Serine/threonine-protein kinase PBS1 (putative) transcript=eq;prot=eq;pid=gene07245 + scf0513160 No
FV4G12090 fve Serine/threonine-protein kinase PBS1 (similar to) transcript=eq;prot=eq;pid=gene06753 - LG4 No
GM08G47570 gma 08 pid=16274173;transcript=eq;prot=eq;name=Glyma08g47570.1 - Gm08 No
GM10G44580 gma 10 pid=16282125;transcript=eq;prot=eq;name=Glyma10g44580.1 + Gm10 No
GM13G28730 gma 13 pid=16291909;transcript=eq;prot=eq;name=Glyma13g28730.1 - Gm13 No
GM15G10360 gma 15 pid=16298299;transcript=eq;prot=eq;name=Glyma15g10360.1 + Gm15 No
GM20G39370 gma 20 pid=16318403;transcript=eq;prot=eq;name=Glyma20g39370.1 + Gm20 No
MD13G009630 mdo transcript=eq;prot=eq;pid=MDP0000691261;tid=MDP0000691261;contig=MDC007678.302 + 13 No
MD13G016420 mdo transcript=eq;prot=eq;pid=MDP0000441764;tid=MDP0000441764;contig=MDC012378.375 + 13 No
MD16G007760 mdo transcript=eq;prot=eq;pid=MDP0000017063;tid=MDP0000017063;contig=MDC019181.99 + 16 No
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