Sub-family  

Parent family
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (5 genes)
lja
Lotus japonicus (1 gene)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (42 genes)
ptr
Populus trichocarpa (2 genes)
sbi
Sorghum bicolor (3 genes)



The gene family ORTHO000449 has 59 genes in 9 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 59 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT4G29090 ath Ribonuclease H-like superfamily protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G34320.1); Has 2218 Blast hits to 2138 proteins in 33 species: Archae - 2; Bacteria - 6; Metazoa - 6; Fungi - 0; Plants - 2203; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).;Ribonuclease H-like superfamily protein transcript=eq;prot=eq; + 4 No
BD1G43500 bdi pid=Bradi1g43500.1;tid=Bradi1g43500.1;GeneName=Bradi1g43500;transcript=eq;prot=eq - Bd1 No
CP00137G00010 cpa name=evm.TU.supercontig_137.1;pid=evm.TU.supercontig_137.1;prot=eq;transcript=eq + supercontig_137 No
FV0G09470 fve Putative ribonuclease H protein At1g65750 (probable) transcript=eq;prot=eq;pid=gene06473 - scf0513158 No
FV2G00950 fve Putative ribonuclease H protein At1g65750 (probable) transcript=eq;prot=eq;pid=gene21841 - LG2 No
FV5G23070 fve hypothetical protein transcript=eq;prot=eq;pid=gene12306 + LG5 No
FV5G27010 fve hypothetical protein transcript=eq;prot=eq;pid=gene29131 - LG5 No
FV7G16250 fve hypothetical protein transcript=eq;prot=eq;pid=gene14248 + LG7 No
LJ0G228030 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_074429;name=LjSGA_074429.1 - LjSGA_074429 No
OS09G38170 osa conserved hypothetical protein transcript=eq;prot=eq; - 9 No
OS11G41300 osa MBTB65 %2D Bric%2Da%2DBrac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain transcript=eq;prot=eq; + 11 No
OS12G33140 osa conserved hypothetical protein transcript=eq;prot=eq; + 12 No
OSINDICA_01G07650 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000527; - Chr01 No
OSINDICA_01G35090 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC002279; - Chr01 No
OSINDICA_01G43290 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC002831; + Chr01 No
OSINDICA_02G17660 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC039648; + Chr02 No
OSINDICA_02G23660 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC013724; + Chr02 No
OSINDICA_02G23670 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC013725; + Chr02 No
OSINDICA_02G40650 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC014800; - Chr02 No
OSINDICA_03G21230 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC006441; - Chr03 No
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