Sub-family  

Parent family
HOM000040
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (9 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (5 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (3 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family ORTHO000380 has 63 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 63 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G31260 aly name=fgenesh2_kg.1__3197__AT1G30220.1;pid=473243;prot=eq;tid=473243 - scaffold_1 No
AL4G21170 aly name=fgenesh2_kg.4__1606__AT2G35740.1;pid=482546;prot=eq;tid=482546 - scaffold_4 No
AL7G26760 aly name=scaffold_702843.1;pid=915101;prot=eq;tid=946614 - scaffold_7 No
AT1G30220 ath Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.;inositol transporter 2 transcript=eq;prot=eq; - 1 No
AT2G35740 ath nositol transporter 3 (INT3); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 4 (TAIR:AT4G16480.1); Has 47745 Blast hits to 37638 proteins in 2394 species: Archae - 613; Bacteria - 23181; Metazoa - 6613; Fungi - 11178; Plants - 4182; Viruses - 0; Other Eukaryotes - 1978 (source: NCBI BLink).;nositol transporter 3 transcript=eq;prot=eq; - 2 No
AT4G16480 ath Encodes a high affinity H+:myo-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of myo-inositol.;inositol transporter 4 transcript=eq;prot=eq; + 4 No
BD1G58430 bdi glucose transmembrane transporter activity, sugar:hydrogen symporter activity (Blast2GO) pid=Bradi1g58430.1;tid=Bradi1g58430.1;GeneName=Bradi1g58430;transcript=eq;prot=eq + Bd1 No
BD5G15440 bdi glucose transmembrane transporter activity, sugar:hydrogen symporter activity, fructose transmembrane transporter activity (Blast2GO) pid=Bradi5g15440.1;tid=Bradi5g15440.1;GeneName=Bradi5g15440;transcript=eq;prot=eq - Bd5 No
CP00027G02640 cpa name=evm.TU.supercontig_27.265;pid=evm.TU.supercontig_27.265;prot=eq;transcript=eq + supercontig_27 No
CP00075G00910 cpa name=evm.TU.supercontig_75.91;pid=evm.TU.supercontig_75.91;prot=eq;transcript=eq + supercontig_75 No
CP32097G00010 cpa name=evm.TU.contig_32097.1;pid=evm.TU.contig_32097.1;prot=eq;transcript=eq - contig_32097 No
FV3G02460 fve Inositol transporter 4 (putative) transcript=eq;prot=eq;pid=gene19793 - LG3 No
FV3G02470 fve Inositol transporter 4 (putative) transcript=eq;prot=eq;pid=gene19794 - LG3 No
GM05G27400 gma 05 pid=16259815;transcript=eq;prot=eq;name=Glyma05g27400.1 - Gm05 No
GM05G27410 gma 05 pid=16259816;transcript=eq;prot=eq;name=Glyma05g27410.1 - Gm05 No
GM08G10390 gma 08 pid=16270647;transcript=eq;prot=eq;name=Glyma08g10390.1 - Gm08 No
GM08G10410 gma 08 pid=16270649;transcript=eq;prot=eq;name=Glyma08g10410.1 - Gm08 No
GM09G01410 gma 09 pid=16274413;transcript=eq;prot=eq;name=Glyma09g01410.1 - Gm09 No
GM09G11120 gma 09 pid=16275421;transcript=eq;prot=eq;name=Glyma09g11120.1 + Gm09 No
GM09G11360 gma 09 pid=16275426;transcript=eq;prot=eq;name=Glyma09g11360.1 + Gm09 No
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