Sub-family  

Parent family
HOM000172
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (4 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (3 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (3 genes)



The gene family ORTHO000321 has 68 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 68 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G44100 aly name=scaffold_104684.1;pid=891890;prot=eq;tid=923403 + scaffold_1 No
AL3G35120 aly name=scaffold_303734.1;pid=899764;prot=eq;tid=931277 + scaffold_3 No
AL4G03030 aly name=scaffold_400317.1;pid=900816;prot=eq;tid=932329 + scaffold_4 No
AL7G06960 aly name=Al_scaffold_0007_654;pid=857155;prot=eq;tid=888668 - scaffold_7 No
AT1G49760 ath polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.;poly(A) binding protein 8 transcript=eq;prot=eq; + 1 No
AT2G23350 ath polyadenylate-binding protein, putative / PABP, putative.Member of the Class II family of PABP proteins. Highly and ubiquitously expressed.;poly(A) binding protein 4 transcript=eq;prot=eq; + 2 No
AT4G34110 ath Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.;poly(A) binding protein 2 transcript=eq;prot=eq; + 4 No
BD3G20460 bdi RRM domain containing protein similar to putative polyadenylate-binding protein, putative / PABP, [Arabidopsis thaliana] AT2G23350 pid=Bradi3g20460.1;tid=Bradi3g20460.1;GeneName=Bradi3g20460;transcript=eq;prot=eq - Bd3 No
BD4G08430 bdi RRM domain containing protein similar to polyadenylate-binding protein, putative, PABP8, [Arabidopsis thaliana] AT1G49760 pid=Bradi4g08430.1;tid=Bradi4g08430.1;GeneName=Bradi4g08430;transcript=eq;prot=eq - Bd4 No
BD5G14980 bdi poly(A) binding, poly(U) binding, poly(rC) binding, mRNA 3'-UTR binding (Blast2GO) pid=Bradi5g14980.1;tid=Bradi5g14980.1;GeneName=Bradi5g14980;transcript=eq;prot=eq - Bd5 No
CP00021G01680 cpa name=evm.TU.supercontig_21.168;pid=evm.TU.supercontig_21.168;prot=eq;transcript=eq + supercontig_21 No
CP00055G01130 cpa name=evm.TU.supercontig_55.113;pid=evm.TU.supercontig_55.113;prot=eq;transcript=eq + supercontig_55 No
CP00200G00230 cpa name=evm.TU.supercontig_200.23;pid=evm.TU.supercontig_200.23;prot=eq;transcript=eq + supercontig_200 No
CR01G08110 cre name=e_gwW.1.40.1;pid=116226;prot=eq;tid=116226;transcript=eq + chromosome_1 No
FV2G33500 fve Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (putative) transcript=eq;prot=eq;pid=gene09134 + LG2 No
FV6G38120 fve Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (similar to) transcript=eq;prot=eq;pid=gene26422 - LG6 No
GM02G11580 gma 02 pid=16247749;transcript=eq;prot=eq;name=Glyma02g11580.1 - Gm02 No
GM04G04300 gma 04 pid=16254823;transcript=eq;prot=eq;name=Glyma04g04300.1 - Gm04 No
GM06G04460 gma 06 pid=16261689;transcript=eq;prot=eq;name=Glyma06g04460.1 - Gm06 No
GM07G33860 gma 07 pid=16268644;transcript=eq;prot=eq;name=Glyma07g33860.1 - Gm07 No
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