Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (12 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (6 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (5 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO000316 has 69 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 69 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G33770 aly name=fgenesh1_pm.C_scaffold_1002596;pid=313816;prot=eq;tid=313816 - scaffold_1 No
AL6G19920 aly name=fgenesh1_pg.C_scaffold_6001657;pid=351064;prot=eq;tid=351064 + scaffold_6 No
AL7G20940 aly name=fgenesh2_kg.7__2140__AT4G21680.1;pid=492707;prot=eq;tid=492707 + scaffold_7 No
AT1G32450 ath Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.;nitrate transporter 1.5 transcript=eq;prot=eq; - 1 No
AT4G21680 ath Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance.;NITRATE TRANSPORTER 1.8 transcript=eq;prot=eq; - 4 No
AT5G19640 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.5 (TAIR:AT1G32450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 5 No
BD3G52096 bdi pid=Bradi3g52096.1;tid=Bradi3g52096.1;GeneName=Bradi3g52096;transcript=eq;prot=eq - Bd3 No
BD3G53380 bdi symporter activity (Blast2GO) pid=Bradi3g53380.1;tid=Bradi3g53380.1;GeneName=Bradi3g53380;transcript=eq;prot=eq - Bd3 No
CP00006G04080 cpa name=evm.TU.supercontig_6.409;pid=evm.TU.supercontig_6.409;prot=eq;transcript=eq - supercontig_6 No
CP00041G00320 cpa name=evm.TU.supercontig_41.32;pid=evm.TU.supercontig_41.32;prot=eq;transcript=eq - supercontig_41 No
FV3G41530 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene24426 - LG3 No
FV3G41550 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene24428 - LG3 No
FV5G30370 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene10741 + LG5 No
FV7G22270 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene03243 + LG7 No
GM01G40850 gma 01 pid=16245869;transcript=eq;prot=eq;name=Glyma01g40850.1 + Gm01 No
GM05G06130 gma 05 pid=16258491;transcript=eq;prot=eq;name=Glyma05g06130.1 - Gm05 No
GM08G47640 gma 08 pid=16274181;transcript=eq;prot=eq;name=Glyma08g47640.1 + Gm08 No
GM09G37220 gma 09 pid=16277498;transcript=eq;prot=eq;name=Glyma09g37220.1 - Gm09 No
GM09G37230 gma 09 pid=16277499;transcript=eq;prot=eq;name=Glyma09g37230.1 - Gm09 No
GM10G44320 gma 10 pid=16282097;transcript=eq;prot=eq;name=Glyma10g44320.1 + Gm10 No
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