Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (6 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (5 genes)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (5 genes)



The gene family ORTHO000312 has 69 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 69 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G04700 aly name=Al_scaffold_0120_2;pid=856281;prot=eq;tid=887794 - scaffold_120 No
AL3G23800 aly name=scaffold_302586.1;pid=898616;prot=eq;tid=930129 - scaffold_3 No
AL4G18170 aly name=fgenesh2_kg.4__1301__AT2G32990.1;pid=482241;prot=eq;tid=482241 + scaffold_4 No
AT2G32990 ath glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).;glycosyl hydrolase 9B8 transcript=eq;prot=eq; + 2 No
AT3G21670 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 7861 Blast hits to 7524 proteins in 1448 species: Archae - 0; Bacteria - 4058; Metazoa - 633; Fungi - 459; Plants - 2170; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 3 No
BD1G44430 bdi Glycosyl hydrolase (GH), subfamily GH9 pid=Bradi1g44430.1;tid=Bradi1g44430.1;GeneName=Bradi1g44430;Name=BdGH9_4;transcript=eq;prot=eq + Bd1 No
BD3G04080 bdi Glycosyl hydrolase (GH), subfamily GH9 pid=Bradi3g04080.1;tid=Bradi3g04080.1;GeneName=Bradi3g04080;Name=BdGH9_11;transcript=eq;prot=eq - Bd3 No
BD3G36210 bdi Glycosyl hydrolase (GH), subfamily GH9 pid=Bradi3g36210.1;tid=Bradi3g36210.1;GeneName=Bradi3g36210;Name=BdGH9_13;transcript=eq;prot=eq - Bd3 No
BD3G47010 bdi symporter activity (Blast2GO) pid=Bradi3g47010.1;tid=Bradi3g47010.1;GeneName=Bradi3g47010;transcript=eq;prot=eq - Bd3 No
BD3G59810 bdi Glycosyl hydrolase (GH), subfamily GH9 pid=Bradi3g59810.1;tid=Bradi3g59810.1;GeneName=Bradi3g59810;Name=BdGH9_16;transcript=eq;prot=eq - Bd3 No
BD4G29640 bdi Glycosyl hydrolase (GH), subfamily GH9 pid=Bradi4g29640.1;tid=Bradi4g29640.1;GeneName=Bradi4g29640;Name=BdGH9_17;transcript=eq;prot=eq - Bd4 No
CP00012G02570 cpa name=evm.TU.supercontig_12.257;pid=evm.TU.supercontig_12.257;prot=eq;transcript=eq + supercontig_12 No
CP00132G00120 cpa name=evm.TU.supercontig_132.12;pid=evm.TU.supercontig_132.12;prot=eq;transcript=eq - supercontig_132 No
CP00132G00130 cpa name=evm.TU.supercontig_132.13;pid=evm.TU.supercontig_132.13;prot=eq;transcript=eq - supercontig_132 No
FV3G26000 fve Endoglucanase 11, Precursor (similar to) transcript=eq;prot=eq;pid=gene03442 - LG3 No
FV6G39860 fve Endoglucanase 11, Precursor (similar to) transcript=eq;prot=eq;pid=gene01234 + LG6 No
GM02G43680 gma 02 pid=16250056;transcript=eq;prot=eq;name=Glyma02g43680.1 + Gm02 No
GM02G43740 gma 02 pid=16250062;transcript=eq;prot=eq;name=Glyma02g43740.1 + Gm02 No
GM02G46320 gma 02 pid=16250381;transcript=eq;prot=eq;name=Glyma02g46320.1 - Gm02 No
GM14G02340 gma 14 pid=16294078;transcript=eq;prot=eq;name=Glyma14g02340.1 - Gm14 No
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